contig_metadata
14 rows where bioproject = "PRJNA615351", tax_clade = "delta/epsilon subdivisions" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1149912 | 1149912 | PRJNA615351_P_NODE_107781_length_287_cov_7.170635_g93682_i0 | PRJNA615351 | 107781 | 287 | 7.170635 | 20.57972245 | Bacteria | 2 | Bacteria | Bacteria | 473 | 4.78e-129 | NTclustered | gi|146429400|gb|EF220216.1| | 34034 | g93682 | i0 | 97.143 | 96.9163763066202 | 280 | 8 | 98 | 0 | 8 | 287 | 11 | 290 | Uncultured delta proteobacterium clone FB-1_C04 16S ribosomal RNA gene, partial sequence | blastn | 27815 | 473 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 15178365 | 15178365 | PRJNA615351_P_NODE_170872_length_164_cov_2.480620_g156772_i0 | PRJNA615351 | 170872 | 164 | 2.48062 | 4.0682168 | Thermodesulfobacteriota | 200940 | Bacteria | Bacteria | 152 | 1.31e-32 | NTclustered | gi|1722470586|gb|CP042467.1| | 2600177 | g156772 | i0 | 84.177 | 355.042682926829 | 158 | 23 | 96 | 2 | 4 | 160 | 702308 | 702464 | Microvenator marinus strain V1718 chromosome, complete genome | blastn | 58227 | 152 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Bradymonadales | Microvenatoraceae | Microvenator | Microvenator marinus | |||
| 22272784 | 22272784 | PRJNA615351_P_NODE_158118_length_179_cov_1.500000_g144018_i0 | PRJNA615351 | 158118 | 179 | 1.5 | 2.685 | uncultured delta proteobacterium | 34034 | Bacteria | Bacteria | 52.8 | 0.015 | NTclustered | gi|2874253659|emb|OY969087.1| | 34034 | g144018 | i0 | 100 | 0.156424581005587 | 28 | 0 | 16 | 0 | 36 | 63 | 7440398 | 7440371 | MAG: uncultured delta proteobacterium isolate MFD01721.bin.c.1 genome assembly, chromosome: 1 | blastn | 28 | 52.8 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 27333584 | 27333584 | PRJNA615351_P_NODE_93963_length_345_cov_3.103226_g79877_i0 | PRJNA615351 | 93963 | 345 | 3.103226 | 10.7061297 | SAR324 cluster bacterium | 2024889 | Bacteria | Bacteria | 59.7 | 9.87e-8 | NR | MDP6204496.1 | 2024889 | g79877 | i0 | 36.2 | 0.817391304347826 | 94 | 40 | 69.6 | 4 | 269 | 30 | 2 | 89 | MDP6204496.1 amidohydrolase family protein [SAR324 cluster bacterium] | diamond | 282 | 59.7 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | SAR324 cluster bacterium | ||||||
| 27365165 | 27365165 | PRJNA615351_P_NODE_145843_length_196_cov_1.956522_g131743_i0 | PRJNA615351 | 145843 | 196 | 1.956522 | 3.83478312 | SAR324 cluster bacterium | 2024889 | Bacteria | Bacteria | 110 | 3.75e-26 | NR | MBF0236369.1 | 2024889 | g131743 | i0 | 84.6 | 6.94897959183673 | 65 | 8 | 99.5 | 1 | 1 | 195 | 274 | 336 | MBF0236369.1 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha [SAR324 cluster bacterium] | diamond | 1362 | 110 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | SAR324 cluster bacterium | ||||||
| 27554054 | 27554054 | PRJNA615351_P_NODE_141964_length_203_cov_1.190476_g127864_i0 | PRJNA615351 | 141964 | 203 | 1.190476 | 2.41666628 | Deltaproteobacteria bacterium RBG_13_58_19 | 1797832 | Bacteria | Bacteria | 47.4 | 5.18e-4 | NR | OGP75284.1 | 1797832 | g127864 | i0 | 38.2 | 0.812807881773399 | 55 | 34 | 81.3 | 0 | 199 | 35 | 795 | 849 | OGP75284.1 MAG: hypothetical protein A2Y80_04575 [Deltaproteobacteria bacterium RBG_13_58_19] | diamond | 165 | 47.4 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Deltaproteobacteria bacterium RBG_13_58_19 | ||||||
| 27788388 | 27788388 | PRJNA615351_P_NODE_156844_length_181_cov_1.089041_g142744_i0 | PRJNA615351 | 156844 | 181 | 1.089041 | 1.97116421 | Bacteria | 2 | Bacteria | Bacteria | 44.3 | 0.0047 | NR | MDP7630861.1 | 2024889 | g142744 | i0 | 38.3 | 2.98342541436464 | 60 | 34 | 99.4 | 2 | 2 | 181 | 267 | 323 | MDP7630861.1 hypothetical protein [SAR324 cluster bacterium] | diamond | 540 | 44.3 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | SAR324 cluster bacterium | ||||||
| 29480098 | 29480098 | PRJNA615351_P_NODE_39690_length_906_cov_4.862227_g29454_i0 | PRJNA615351 | 39690 | 906 | 4.862227 | 44.05177662 | Deltaproteobacteria bacterium GWA2_45_12 | 1797805 | Bacteria | Bacteria | 66.6 | 3.67e-9 | NR | OGP07419.1 | 1797805 | g29454 | i0 | 27.2 | 0.596026490066225 | 180 | 123 | 57.6 | 4 | 61 | 582 | 2 | 179 | OGP07419.1 MAG: hypothetical protein A2048_05880 [Deltaproteobacteria bacterium GWA2_45_12] | diamond | 540 | 66.6 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Deltaproteobacteria bacterium GWA2_45_12 | ||||||
| 29525002 | 29525002 | PRJNA615351_P_NODE_9310_length_2101_cov_4.461762_g6662_i0 | PRJNA615351 | 9310 | 2101 | 4.461762 | 93.74161962 | Myxococcota | 2818505 | Bacteria | Bacteria | 54.3 | 0.00246 | NR | QDG52427.1 | 2292766 | g6662 | i0 | 34.5 | 0.364112327463113 | 119 | 66 | 17 | 1 | 671 | 1027 | 58 | 164 | QDG52427.1 tetratricopeptide repeat protein [Persicimonas caeni] | diamond | 765 | 54.3 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Bradymonadales | Bradymonadaceae | Persicimonas | Persicimonas caeni | |||
| 30851590 | 30851590 | PRJNA615351_P_NODE_35754_length_989_cov_5.911950_g9898_i1 | PRJNA615351 | 35754 | 989 | 5.91195 | 58.4691855 | Bacteria | 2 | Bacteria | Bacteria | 180 | 2.84e-49 | NR | MBA2664539.1 | 2946527 | g9898 | i1 | 36 | 2.80889787664307 | 311 | 192 | 94.3 | 5 | 55 | 987 | 39 | 342 | MBA2664539.1 DegT/DnrJ/EryC1/StrS aminotransferase family protein [Lujinxingiaceae bacterium] | diamond | 2778 | 180 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Bradymonadales | Lujinxingiaceae | Lujinxingiaceae bacterium | ||||
| 31154408 | 31154408 | PRJNA615351_P_NODE_67915_length_520_cov_1.552577_g54123_i0 | PRJNA615351 | 67915 | 520 | 1.552577 | 8.0734004 | uncultured delta proteobacterium HF | 34034 | Bacteria | Bacteria | 46.2 | 0.00687 | NR | ADI19205.1 | 710829 | g54123 | i0 | 64.3 | 0.484615384615385 | 28 | 10 | 16.2 | 0 | 86 | 3 | 59 | 86 | ADI19205.1 hypothetical protein [uncultured delta proteobacterium HF0130_20J24] | diamond | 252 | 46.2 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium HF0130_20J24 | ||||||
| 31376135 | 31376135 | PRJNA615351_P_NODE_31416_length_1094_cov_5.372049_g15080_i1 | PRJNA615351 | 31416 | 1094 | 5.372049 | 58.77021606 | Deltaproteobacteria bacterium RIFCSPHIGHO2_ | 2026735 | Bacteria | Bacteria | 58.5 | 1.76e-5 | NR | OGQ04977.1 | 1797856 | g15080 | i1 | 35.6 | 0.474405850091408 | 90 | 57 | 24.4 | 1 | 939 | 673 | 55 | 144 | OGQ04977.1 MAG: hypothetical protein A2712_04800 [Deltaproteobacteria bacterium RIFCSPHIGHO2_01_FULL_43_49] | diamond | 519 | 58.5 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Deltaproteobacteria bacterium RIFCSPHIGHO2_01_FULL_43_49 | ||||||
| 32211544 | 32211544 | PRJNA615351_P_NODE_90238_length_364_cov_3.331307_g76159_i0 | PRJNA615351 | 90238 | 364 | 3.331307 | 12.12595748 | Bacteria | 2 | Bacteria | Bacteria | 61.6 | 3.44e-8 | NR | OQB76601.1 | 1852867 | g76159 | i0 | 39.4 | 3.82417582417582 | 94 | 45 | 77.5 | 2 | 358 | 77 | 411 | 492 | OQB76601.1 MAG: hypothetical protein BWX92_01664 [Deltaproteobacteria bacterium ADurb.Bin135] | diamond | 1392 | 61.6 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Deltaproteobacteria bacterium ADurb.Bin135 | ||||||
| 32262033 | 32262033 | PRJNA615351_P_NODE_13738_length_1771_cov_5.821429_g9898_i0 | PRJNA615351 | 13738 | 1771 | 5.821429 | 103.09750759 | Lujinxingiaceae bacterium | 2946527 | Bacteria | Bacteria | 194 | 4.22e-52 | NR | MBA2664539.1 | 2946527 | g9898 | i0 | 34.3 | 0.611518915866742 | 361 | 226 | 60.5 | 7 | 1717 | 647 | 39 | 392 | MBA2664539.1 DegT/DnrJ/EryC1/StrS aminotransferase family protein [Lujinxingiaceae bacterium] | diamond | 1083 | 194 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Bradymonadales | Lujinxingiaceae | Lujinxingiaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;