contig_metadata
15 rows where bioproject = "PRJNA615351" and tax_clade = "Methanomada group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3146788 | 3146788 | PRJNA615351_P_NODE_77883_length_440_cov_1.580247_g63862_i0 | PRJNA615351 | 77883 | 440 | 1.580247 | 6.9530868 | uncultured Methanobrevibacter sp. | 253161 | Archaea | Archaea | 147 | 6.37e-38 | NR | WP_295614776.1 | 253161 | g63862 | i0 | 60.4 | 1.51363636363636 | 111 | 42 | 75.7 | 1 | 333 | 1 | 611 | 719 | WP_295614776.1 cyclic nucleotide-binding serine/threonine-protein kinase, partial [uncultured Methanobrevibacter sp.] | diamond | 666 | 147 | 1 | Archaea | Methanomada group | Methanobacteriati | Methanobacteriota | Methanobacteria | Methanobacteriales | Methanobacteriaceae | Methanobrevibacter | uncultured Methanobrevibacter sp. | |
| 3701621 | 3701621 | PRJNA615351_P_NODE_181623_length_154_cov_2.991597_g167523_i0 | PRJNA615351 | 181623 | 154 | 2.991597 | 4.60705938 | uncultured Methanobrevibacter sp. | 253161 | Archaea | Archaea | 97.4 | 5.84e-22 | NR | WP_295614768.1 | 253161 | g167523 | i0 | 86 | 0.974025974025974 | 50 | 7 | 97.4 | 0 | 152 | 3 | 731 | 780 | WP_295614768.1 GTP-binding protein [uncultured Methanobrevibacter sp.] | diamond | 150 | 97.4 | 1 | Archaea | Methanomada group | Methanobacteriati | Methanobacteriota | Methanobacteria | Methanobacteriales | Methanobacteriaceae | Methanobrevibacter | uncultured Methanobrevibacter sp. | |
| 24821765 | 24821765 | PRJNA615351_P_NODE_144380_length_199_cov_0.975610_g130280_i0 | PRJNA615351 | 144380 | 199 | 0.97561 | 1.9414639 | Methanobrevibacter sp. YE315 | 1609968 | Archaea | Archaea | 56.5 | 0.001 | NTclustered | gi|985614202|gb|CP010834.1| | 1609968 | g130280 | i0 | 100 | 0.587939698492462 | 30 | 0 | 15 | 0 | 168 | 197 | 1389617 | 1389588 | Methanobrevibacter sp. YE315, complete genome | blastn | 117 | 56.5 | 1 | Archaea | Methanomada group | Methanobacteriati | Methanobacteriota | Methanobacteria | Methanobacteriales | Methanobacteriaceae | Methanobrevibacter | Methanobrevibacter sp. YE315 | |
| 27080337 | 27080337 | PRJNA615351_P_NODE_114362_length_266_cov_2.333333_g100263_i0 | PRJNA615351 | 114362 | 266 | 2.333333 | 6.20666578 | Methanobrevibacter sp. | 66852 | Archaea | Archaea | 43.5 | 0.0155 | NR | MBO7212627.1 | 66852 | g100263 | i0 | 38.2 | 1.80451127819549 | 76 | 22 | 84.6 | 3 | 232 | 8 | 4 | 55 | MBO7212627.1 hypothetical protein [Methanobrevibacter sp.] | diamond | 480 | 43.5 | 1 | Archaea | Methanomada group | Methanobacteriati | Methanobacteriota | Methanobacteria | Methanobacteriales | Methanobacteriaceae | Methanobrevibacter | Methanobrevibacter sp. | |
| 27459818 | 27459818 | PRJNA615351_P_NODE_34543_length_1018_cov_1.600203_g25439_i0 | PRJNA615351 | 34543 | 1018 | 1.600203 | 16.29006654 | Methanosphaera sp. | 2666342 | Archaea | Archaea | 56.2 | 1.05e-4 | NR | MEE3419417.1 | 2666342 | g25439 | i0 | 19.3 | 0.671905697445973 | 228 | 178 | 66.3 | 4 | 754 | 80 | 104 | 328 | MEE3419417.1 PX and WD40 repeat domain-containing protein [Methanosphaera sp.] | diamond | 684 | 56.2 | 1 | Archaea | Methanomada group | Methanobacteriati | Methanobacteriota | Methanobacteria | Methanobacteriales | Methanobacteriaceae | Methanosphaera | Methanosphaera sp. | |
| 27712634 | 27712634 | PRJNA615351_P_NODE_16924_length_1599_cov_16.347826_g5147_i1 | PRJNA615351 | 16924 | 1599 | 16.347826 | 261.40173774 | Methanothermobacter sp. THM-1 | 2606911 | Archaea | Archaea | 53.5 | 0.00196 | NR | WP_191216576.1 | 2606911 | g5147 | i1 | 32.6 | 0.418386491557223 | 89 | 50 | 16.5 | 3 | 1114 | 851 | 71 | 150 | WP_191216576.1 DUF7411 family protein [Methanothermobacter sp. THM-1] | diamond | 669 | 53.5 | 1 | Archaea | Methanomada group | Methanobacteriati | Methanobacteriota | Methanobacteria | Methanobacteriales | Methanobacteriaceae | Methanothermobacter | Methanothermobacter sp. THM-1 | |
| 28185697 | 28185697 | PRJNA615351_P_NODE_7306_length_2321_cov_17.716973_g5194_i0 | PRJNA615351 | 7306 | 2321 | 17.716973 | 411.21094333 | Methanobrevibacter sp. | 66852 | Archaea | Archaea | 50.4 | 0.0445 | NR | WP_292749283.1 | 66852 | g5194 | i0 | 29 | 0.178371391641534 | 138 | 81 | 15.9 | 5 | 1215 | 847 | 268 | 403 | WP_292749283.1 C1 family peptidase [Methanobrevibacter sp.] | diamond | 414 | 50.4 | 1 | Archaea | Methanomada group | Methanobacteriati | Methanobacteriota | Methanobacteria | Methanobacteriales | Methanobacteriaceae | Methanobrevibacter | Methanobrevibacter sp. | |
| 29272065 | 29272065 | PRJNA615351_P_NODE_61369_length_582_cov_1.775137_g48019_i0 | PRJNA615351 | 61369 | 582 | 1.775137 | 10.33129734 | root | 1 | Root_unresolved | Root_unresolved | 292 | 1.01e-90 | NR | WP_295614768.1 | 253161 | g48019 | i0 | 72.8 | 2.95360824742268 | 191 | 52 | 98.5 | 0 | 581 | 9 | 310 | 500 | WP_295614768.1 GTP-binding protein [uncultured Methanobrevibacter sp.] | diamond | 1719 | 292 | 1 | Archaea | Methanomada group | Methanobacteriati | Methanobacteriota | Methanobacteria | Methanobacteriales | Methanobacteriaceae | Methanobrevibacter | uncultured Methanobrevibacter sp. | |
| 29303816 | 29303816 | PRJNA615351_P_NODE_38009_length_939_cov_17.869469_g28147_i0 | PRJNA615351 | 38009 | 939 | 17.869469 | 167.79431391 | Methanobrevibacter | 2172 | Archaea | Archaea | 103 | 4.19e-22 | NR | WP_303739603.1 | 190975 | g28147 | i0 | 31.1 | 3.04472843450479 | 238 | 141 | 69.3 | 6 | 50 | 700 | 9 | 244 | WP_303739603.1 MIP/aquaporin family protein [Methanobrevibacter thaueri] | diamond | 2859 | 103 | 1 | Archaea | Methanomada group | Methanobacteriati | Methanobacteriota | Methanobacteria | Methanobacteriales | Methanobacteriaceae | Methanobrevibacter | Methanobrevibacter thaueri | |
| 29543348 | 29543348 | PRJNA615351_P_NODE_123610_length_241_cov_1.359223_g109510_i0 | PRJNA615351 | 123610 | 241 | 1.359223 | 3.27572743 | uncultured Methanobrevibacter sp. | 253161 | Archaea | Archaea | 61.6 | 2.74e-9 | NR | WP_296892731.1 | 253161 | g109510 | i0 | 45.7 | 1.84232365145228 | 70 | 37 | 87.1 | 1 | 2 | 211 | 1 | 69 | WP_296892731.1 ABC transporter ATP-binding protein [uncultured Methanobrevibacter sp.] | diamond | 444 | 61.6 | 1 | Archaea | Methanomada group | Methanobacteriati | Methanobacteriota | Methanobacteria | Methanobacteriales | Methanobacteriaceae | Methanobrevibacter | uncultured Methanobrevibacter sp. | |
| 30396803 | 30396803 | PRJNA615351_P_NODE_145113_length_197_cov_2.537037_g131013_i0 | PRJNA615351 | 145113 | 197 | 2.537037 | 4.99796289 | Methanotorris igneus | 2189 | Archaea | Archaea | 75.5 | 5.78e-14 | NR | WP_013799761.1 | 2189 | g131013 | i0 | 61.9 | 0.959390862944162 | 63 | 23 | 95.9 | 1 | 8 | 196 | 582 | 643 | WP_013799761.1 methionine--tRNA ligase [Methanotorris igneus] | diamond | 189 | 75.5 | 1 | Archaea | Methanomada group | Methanobacteriati | Methanobacteriota | Methanococci | Methanococcales | Methanocaldococcaceae | Methanotorris | Methanotorris igneus | |
| 30428390 | 30428390 | PRJNA615351_P_NODE_35113_length_1004_cov_4.098039_g25878_i0 | PRJNA615351 | 35113 | 1004 | 4.098039 | 41.14431156 | Methanobrevibacter sp. | 66852 | Archaea | Archaea | 233 | 1.49e-70 | NR | WP_292806969.1 | 66852 | g25878 | i0 | 39.5 | 0.99800796812749 | 334 | 185 | 95.3 | 4 | 3 | 959 | 11 | 342 | WP_292806969.1 WD40 repeat domain-containing protein [Methanobrevibacter sp.] | diamond | 1002 | 233 | 1 | Archaea | Methanomada group | Methanobacteriati | Methanobacteriota | Methanobacteria | Methanobacteriales | Methanobacteriaceae | Methanobrevibacter | Methanobrevibacter sp. | |
| 31312816 | 31312816 | PRJNA615351_P_NODE_80735_length_421_cov_1.642487_g66693_i0 | PRJNA615351 | 80735 | 421 | 1.642487 | 6.91487027 | Methanosphaera sp. ISO3-F5 | 1452353 | Archaea | Archaea | 60.8 | 1.18e-7 | NR | WP_323735470.1 | 1452353 | g66693 | i0 | 34.2 | 1.67458432304038 | 111 | 69 | 78.4 | 2 | 412 | 83 | 69 | 176 | WP_323735470.1 AAA domain-containing protein [Methanosphaera sp. ISO3-F5] | diamond | 705 | 60.8 | 1 | Archaea | Methanomada group | Methanobacteriati | Methanobacteriota | Methanobacteria | Methanobacteriales | Methanobacteriaceae | Methanosphaera | Methanosphaera sp. ISO3-F5 | |
| 31452399 | 31452399 | PRJNA615351_P_NODE_94776_length_341_cov_3.127451_g80687_i0 | PRJNA615351 | 94776 | 341 | 3.127451 | 10.66460791 | root | 1 | Root_unresolved | Root_unresolved | 92.8 | 3.22e-19 | NR | WP_295614768.1 | 253161 | g80687 | i0 | 55.6 | 1.24926686217009 | 72 | 32 | 63.3 | 0 | 220 | 5 | 172 | 243 | WP_295614768.1 GTP-binding protein [uncultured Methanobrevibacter sp.] | diamond | 426 | 92.8 | 1 | Archaea | Methanomada group | Methanobacteriati | Methanobacteriota | Methanobacteria | Methanobacteriales | Methanobacteriaceae | Methanobrevibacter | uncultured Methanobrevibacter sp. | |
| 32021631 | 32021631 | PRJNA615351_P_NODE_38538_length_929_cov_2.223714_g28558_i0 | PRJNA615351 | 38538 | 929 | 2.223714 | 20.65830306 | root | 1 | Root_unresolved | Root_unresolved | 59.7 | 2.18e-6 | NR | WP_181501616.1 | 39152 | g28558 | i0 | 40 | 1.56620021528525 | 65 | 39 | 21 | 0 | 369 | 563 | 26 | 90 | WP_181501616.1 DUF4326 domain-containing protein [Methanococcus maripaludis] | diamond | 1455 | 60.1 | 0.993344425956739 | Archaea | Methanomada group | Methanobacteriati | Methanobacteriota | Methanococci | Methanococcales | Methanococcaceae | Methanococcus | Methanococcus maripaludis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;