RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA615351", tax_clade = "FCB group" and tax_phylum = "Candidatus Hydrogenedentota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 6 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 6 ✖

bioproject 1

  • PRJNA615351 · 6 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27174947 27174947 PRJNA615351_P_NODE_104362_length_300_cov_1.992453_g90263_i0 PRJNA615351 104362 300 1.992453 5.977359 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 87.8 5.37e-19   NR MBI2432841.1 2030809 g90263 i0 50 6.9 82 40 82 1 284 39 71 151 MBI2432841.1 superoxide dismutase family protein [Candidatus Hydrogenedentota bacterium] diamond 2070 87.8 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
28122822 28122822 PRJNA615351_P_NODE_82585_length_409_cov_1.553476_g68531_i0 PRJNA615351 82585 409 1.553476 6.35371684 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 45.8 0.0173   NR MBX7257789.1 2030809 g68531 i0 41.7 0.440097799511002 60 31 41.1 2 390 223 180 239 MBX7257789.1 O-antigen ligase family protein [Candidatus Hydrogenedentota bacterium] diamond 180 45.8 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
28501775 28501775 PRJNA615351_P_NODE_89587_length_368_cov_1.372372_g75509_i0 PRJNA615351 89587 368 1.372372 5.05032896 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 66.2 7.98e-10   NR MFP6581223.1 2030809 g75509 i0 34.3 3.26902173913043 108 65 84.8 2 339 28 4 109 MFP6581223.1 NADP-dependent malic enzyme [Candidatus Hydrogenedentota bacterium] diamond 1203 66.2 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
30302161 30302161 PRJNA615351_P_NODE_80872_length_420_cov_1.540260_g66830_i0 PRJNA615351 80872 420 1.54026 6.469092 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 47.4 0.00587   NR MEK8023911.1 2030809 g66830 i0 34.2 1.56428571428571 76 46 54.3 1 175 402 599 670 MEK8023911.1 tetratricopeptide repeat protein [Candidatus Hydrogenedentota bacterium] diamond 657 47.4 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
30522613 30522613 PRJNA615351_P_NODE_108113_length_286_cov_2.633466_g94014_i0 PRJNA615351 108113 286 2.633466 7.53171276 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 59.3 9.19e-8   NR MFP6583619.1 2030809 g94014 i0 47.1 0.713286713286713 68 33 68.2 2 88 282 37 104 MFP6583619.1 immunoglobulin-like domain-containing protein [Candidatus Hydrogenedentota bacterium] diamond 204 59.3 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
31692418 31692418 PRJNA615351_P_NODE_94257_length_344_cov_1.792880_g80169_i0 PRJNA615351 94257 344 1.79288 6.1675072 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 45.4 0.0137   NR MFM1921694.1 2030809 g80169 i0 46.9 0.427325581395349 49 25 41.9 1 277 134 635 683 MFM1921694.1 hypothetical protein [Candidatus Hydrogenedentota bacterium] diamond 147 45.4 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;