RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA615351" and tax_clade = "DHVE2 group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • DHVE2 group · 2 ✖

bioproject 1

  • PRJNA615351 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28154394 28154394 PRJNA615351_P_NODE_121605_length_246_cov_1.696682_g107505_i0 PRJNA615351 121605 246 1.696682 4.17383772 Candidatus Aciduliprofundum boonei 379547 Archaea Archaea 45.8 0.00178   NR WP_008083872.1 379547 g107505 i0 34.3 0.853658536585366 70 43 85.4 1 215 6 33 99 WP_008083872.1 RNA 2',3'-cyclic phosphodiesterase [Candidatus Aciduliprofundum boonei] diamond 210 45.8 1 Archaea DHVE2 group Methanobacteriati Thermoplasmatota       Candidatus Aciduliprofundum Candidatus Aciduliprofundum boonei
32293883 32293883 PRJNA615351_P_NODE_69279_length_507_cov_2.330508_g55424_i0 PRJNA615351 69279 507 2.330508 11.81567556 Aciduliprofundum sp. MAR 2060325 Archaea Archaea 63.5 2.9e-8   NR WP_015282595.1 673860 g55424 i0 42.2 0.49112426035503 83 47 48.5 1 278 33 13 95 WP_015282595.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme [Aciduliprofundum sp. MAR08-339] diamond 249 63.5 1 Archaea DHVE2 group Methanobacteriati Thermoplasmatota       Candidatus Aciduliprofundum Aciduliprofundum sp. MAR08-339

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;