contig_metadata
11 rows where bioproject = "PRJNA615351", tax_clade = "Amoebozoa" and tax_phylum = "Tubulinea"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4423566 | 4423566 | PRJNA615351_P_NODE_95344_length_338_cov_4.267327_g81252_i0 | PRJNA615351 | 95344 | 338 | 4.267327 | 14.42356526 | Copromyxa sp. PKD 2011 | 1215977 | Tubulinea | other_Eukaryota | 623 | 5.389999999999999e-174 | NTclustered | gi|399764167|gb|JQ271678.1| | 1215977 | g81252 | i0 | 100 | 80.6538461538462 | 337 | 0 | 99 | 0 | 2 | 338 | 1718 | 1382 | Copromyxa sp. PKD 2011 strain ZEB1 18S ribosomal RNA gene, partial sequence | blastn | 27261 | 623 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Copromyxa | Copromyxa sp. PKD 2011 | ||
| 6974122 | 6974122 | PRJNA615351_P_NODE_20366_length_1449_cov_19.948373_g14792_i0 | PRJNA615351 | 20366 | 1449 | 19.948373 | 289.05192477 | Copromyxa protea | 931554 | Tubulinea | other_Eukaryota | 1563 | 0 | NTclustered | gi|508737347|dbj|AB766053.1| | 931554 | g14792 | i0 | 87.222 | 25.6894409937888 | 1393 | 152 | 95 | 16 | 28 | 1398 | 1 | 1389 | Copromyxa protea EFL mRNA for elongation factor-like protein, complete cds, strain: ATCC PRA-324 | blastn | 37224 | 1563 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Copromyxa | Copromyxa protea | ||
| 15898631 | 15898631 | PRJNA615351_P_NODE_26873_length_1223_cov_4.845960_g19562_i0 | PRJNA615351 | 26873 | 1223 | 4.84596 | 59.2660908 | Amoeba proteus | 5775 | Tubulinea | other_Eukaryota | 688 | 7.32e-248 | NR | AAP88974.1 | 5775 | g19562 | i0 | 84.4 | 0.956663941128373 | 390 | 61 | 95.7 | 0 | 16 | 1185 | 1 | 390 | AAP88974.1 S-adenosylmethionine synthetase 2 [Amoeba proteus] | diamond | 1170 | 688 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Amoebidae | Amoeba | Amoeba proteus | ||
| 16452761 | 16452761 | PRJNA615351_P_NODE_166453_length_169_cov_1.492537_g152353_i0 | PRJNA615351 | 166453 | 169 | 1.492537 | 2.52238753 | Eukaryota | 2759 | unresolved_Eukaryota | other_Eukaryota | 99 | 1.79e-16 | NTclustered | gi|61655688|gb|AY848964.1| | 318526 | g152353 | i0 | 87.209 | 49.7573964497041 | 86 | 11 | 51 | 0 | 51 | 136 | 1958 | 2043 | Heleopera sphagni small subunit ribosomal RNA gene, partial sequence | blastn | 8409 | 100 | 0.99 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Arcellinida | Heleoperidae | Heleopera | Heleopera sphagni | ||
| 26890760 | 26890760 | PRJNA615351_P_NODE_132541_length_220_cov_3.870270_g118441_i0 | PRJNA615351 | 132541 | 220 | 3.87027 | 8.514594 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 59.3 | 2.36e-8 | NR | AAY21191.1 | 5778 | g118441 | i0 | 43.8 | 1.74545454545455 | 64 | 36 | 87.3 | 0 | 218 | 27 | 179 | 242 | AAY21191.1 Rpl7A, partial [Vermamoeba vermiformis] | diamond | 384 | 59.3 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 27901444 | 27901444 | PRJNA615351_P_NODE_145905_length_196_cov_1.739130_g131805_i0 | PRJNA615351 | 145905 | 196 | 1.73913 | 3.4086948 | Amoeba proteus | 5775 | Tubulinea | other_Eukaryota | 118 | 5.44e-29 | NR | AAD33718.1 | 5775 | g131805 | i0 | 84.4 | 0.979591836734694 | 64 | 10 | 98 | 0 | 3 | 194 | 82 | 145 | AAD33718.1 myosin heavy chain [Amoeba proteus] | diamond | 192 | 118 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Amoebidae | Amoeba | Amoeba proteus | ||
| 30111898 | 30111898 | PRJNA615351_P_NODE_164032_length_172_cov_1.167883_g149932_i0 | PRJNA615351 | 164032 | 172 | 1.167883 | 2.00875876 | Amoeba proteus | 5775 | Tubulinea | other_Eukaryota | 55.5 | 4.74e-7 | NR | AAD33718.1 | 5775 | g149932 | i0 | 62.8 | 0.75 | 43 | 16 | 75 | 0 | 172 | 44 | 886 | 928 | AAD33718.1 myosin heavy chain [Amoeba proteus] | diamond | 129 | 55.5 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Amoebidae | Amoeba | Amoeba proteus | ||
| 30143184 | 30143184 | PRJNA615351_P_NODE_137792_length_210_cov_1.942857_g123692_i0 | PRJNA615351 | 137792 | 210 | 1.942857 | 4.0799997 | Amoeba proteus | 5775 | Tubulinea | other_Eukaryota | 114 | 2.94e-30 | NR | AAW58116.1 | 5775 | g123692 | i0 | 76.8 | 0.985714285714286 | 69 | 16 | 98.6 | 0 | 3 | 209 | 74 | 142 | AAW58116.1 peroxiredoxin, partial [Amoeba proteus] | diamond | 207 | 114 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Amoebidae | Amoeba | Amoeba proteus | ||
| 30617384 | 30617384 | PRJNA615351_P_NODE_138813_length_208_cov_2.450867_g124713_i0 | PRJNA615351 | 138813 | 208 | 2.450867 | 5.09780336 | Amoeba proteus | 5775 | Tubulinea | other_Eukaryota | 84.3 | 5.12e-17 | NR | AAD33718.1 | 5775 | g124713 | i0 | 69.1 | 0.980769230769231 | 68 | 20 | 96.6 | 1 | 203 | 3 | 373 | 440 | AAD33718.1 myosin heavy chain [Amoeba proteus] | diamond | 204 | 84.3 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Amoebidae | Amoeba | Amoeba proteus | ||
| 31122679 | 31122679 | PRJNA615351_P_NODE_166575_length_169_cov_1.455224_g152475_i0 | PRJNA615351 | 166575 | 169 | 1.455224 | 2.45932856 | Chaos carolinense | 160823 | Tubulinea | other_Eukaryota | 93.2 | 2.54e-22 | NR | AFX73058.1 | 160823 | g152475 | i0 | 78.6 | 0.994082840236686 | 56 | 12 | 99.4 | 0 | 168 | 1 | 46 | 101 | AFX73058.1 14-3-3 protein, partial [Chaos carolinense] | diamond | 168 | 93.2 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Amoebidae | Chaos | Chaos carolinense | ||
| 31787007 | 31787007 | PRJNA615351_P_NODE_184897_length_152_cov_1.316239_g170797_i0 | PRJNA615351 | 184897 | 152 | 1.316239 | 2.00068328 | Amoeba proteus | 5775 | Tubulinea | other_Eukaryota | 59.3 | 1.52e-8 | NR | AAD33718.1 | 5775 | g170797 | i0 | 60 | 0.888157894736842 | 45 | 18 | 88.8 | 0 | 152 | 18 | 588 | 632 | AAD33718.1 myosin heavy chain [Amoeba proteus] | diamond | 135 | 59.3 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Amoebidae | Amoeba | Amoeba proteus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;