RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA615175", tax_phylum = "Thermoproteota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 1 ✖

tax_phylum 1

  • Thermoproteota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA615175 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31913621 31913621 PRJNA615175_P_NODE_14297_length_375_cov_3.105960_g14129_i0 PRJNA615175 14297 375 3.10596 11.64735 Thermofilaceae archaeon 2268203 Archaea Archaea 95.5 1.49e-20   NR MEM0307463.1 2268203 g14129 i0 38.6 8.312 132 65 94.4 2 20 373 77 206 MEM0307463.1 ribosome biogenesis/translation initiation ATPase RLI [Thermofilaceae archaeon] diamond 3117 95.5 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermofilales Thermofilaceae   Thermofilaceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;