RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA615175" and tax_phylum = "Lentisphaerota"

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tax_superkingdom 1

tax_phylum 1

  • Lentisphaerota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA615175 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14624037 14624037 PRJNA615175_P_NODE_3552_length_824_cov_3.973369_g3405_i0 PRJNA615175 3552 824 3.973369 32.74056056 Lentisphaerota bacterium 1932692 Bacteria Bacteria 190 1.94e-56   NR NQT94215.1 1932692 g3405 i0 48.2 2.07888349514563 193 96 68.8 1 118 684 15 207 NQT94215.1 TIGR00730 family Rossman fold protein [Lentisphaerota bacterium] diamond 1713 190 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerota bacterium
28280242 28280242 PRJNA615175_P_NODE_22186_length_292_cov_2.109589_g22018_i0 PRJNA615175 22186 292 2.109589 6.15999988 Lentisphaerota bacterium 1932692 Bacteria Bacteria 154 3.69e-43   NR MCP4102613.1 1932692 g22018 i0 70.1 0.996575342465753 97 29 99.7 0 291 1 129 225 MCP4102613.1 hypothetical protein [Lentisphaerota bacterium] diamond 291 154 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;