RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA615175", tax_phylum = "Kitrinoviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 5 ✖

tax_phylum 1

  • Kitrinoviricota · 5 ✖

tax_kingdom 1

bioproject 1

  • PRJNA615175 · 5 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
595191 595191 PRJNA615175_P_NODE_4261_length_751_cov_37.986726_g4102_i0 PRJNA615175 4261 751 37.986726 285.28031226 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.021   NTclustered gi|1995060321|gb|MN450069.1| 12164 g4102 i0 100 0.0386151797603196 29 0 4 0 1 29 13 41 Carnation latent virus isolate KL, complete genome blastn 29 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
6973614 6973614 PRJNA615175_P_NODE_4906_length_697_cov_47.615385_g4102_i1 PRJNA615175 4906 697 47.615385 331.87923345 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.019   NTclustered gi|1995060321|gb|MN450069.1| 12164 g4102 i1 100 0.0416068866571019 29 0 4 0 1 29 13 41 Carnation latent virus isolate KL, complete genome blastn 29 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
9523405 9523405 PRJNA615175_P_NODE_2588_length_959_cov_113.399549_g2172_i1 PRJNA615175 2588 959 113.399549 1087.50167491 Jujube closterovirus 1 3043313 Viruses Viruses 56.5 0.008   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g2172 i1 100 0.0312825860271116 30 0 3 0 1 30 6 35 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 30 56.5 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
14623935 14623935 PRJNA615175_P_NODE_3032_length_893_cov_8.103659_g2896_i0 PRJNA615175 3032 893 8.103659 72.36567487 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.025   NTclustered gi|1995060321|gb|MN450069.1| 12164 g2896 i0 100 0.032474804031355 29 0 3 0 865 893 41 13 Carnation latent virus isolate KL, complete genome blastn 29 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
15897965 15897965 PRJNA615175_P_NODE_3173_length_873_cov_117.415000_g2172_i2 PRJNA615175 3173 873 117.415 1025.03295 Jujube closterovirus 1 3043313 Viruses Viruses 56.5 0.007   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g2172 i2 100 0.0343642611683849 30 0 3 0 844 873 35 6 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 30 56.5 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;