RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA615175", tax_kingdom = "Thermotogati" and tax_phylum = "Thermotogota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Thermotogota · 2 ✖

tax_kingdom 1

  • Thermotogati · 2 ✖

bioproject 1

  • PRJNA615175 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6973409 6973409 PRJNA615175_P_NODE_27066_length_256_cov_1.262295_g26898_i0 PRJNA615175 27066 256 1.262295 3.2314752 Thermotoga profunda 1508420 Bacteria Bacteria 52.8 0.023   NTclustered gi|597439398|dbj|AP014510.1| 1408160 g26898 i0 96.774 0.12109375 31 1 12 0 35 65 1986798 1986828 Thermotoga profunda AZM34c06 DNA, complete genome blastn 31 52.8 1 Bacteria   Thermotogati Thermotogota Thermotogae Thermotogales Thermotogaceae Thermotoga Thermotoga profunda
32578182 32578182 PRJNA615175_P_NODE_23499_length_282_cov_2.784689_g23331_i0 PRJNA615175 23499 282 2.784689 7.85282298 Thermosipho sp. (in: thermotogales) 1968895 Bacteria Bacteria 44.7 0.0102   NR MBO8140151.1 1968895 g23331 i0 34 1.03191489361702 97 52 91.5 3 263 6 123 218 MBO8140151.1 ribonuclease III [Thermosipho sp. (in: thermotogales)] diamond 291 44.7 1 Bacteria   Thermotogati Thermotogota Thermotogae Thermotogales Fervidobacteriaceae Thermosipho Thermosipho sp. (in: thermotogales)

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;