contig_metadata
9 rows where bioproject = "PRJNA615175", tax_kingdom = "Pseudomonadati" and tax_phylum = "Thermodesulfobacteriota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 11353210 | 11353210 | PRJNA615175_P_NODE_24849_length_272_cov_2.291457_g24681_i0 | PRJNA615175 | 24849 | 272 | 2.291457 | 6.23276304 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 359 | 1.31e-94 | NTclustered | gi|2431398965|gb|CP116247.1| | 881 | g24681 | i0 | 100 | 97.5073529411765 | 194 | 0 | 71 | 0 | 79 | 272 | 99492 | 99299 | Nitratidesulfovibrio vulgaris strain L2 plasmid pDsulf-L2-2, complete sequence | blastn | 26522 | 361 | 0.994459833795014 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Nitratidesulfovibrio | Nitratidesulfovibrio vulgaris | ||
| 29227926 | 29227926 | PRJNA615175_P_NODE_5109_length_681_cov_3.409539_g4946_i0 | PRJNA615175 | 5109 | 681 | 3.409539 | 23.21896059 | Desulfuromonadaceae bacterium | 2099677 | Bacteria | Bacteria | 68.2 | 3.01e-9 | NR | MDD2898332.1 | 2099677 | g4946 | i0 | 40.4 | 0.436123348017621 | 99 | 56 | 43.6 | 2 | 81 | 377 | 424 | 519 | MDD2898332.1 PcfJ domain-containing protein [Desulfuromonadaceae bacterium] | diamond | 297 | 68.2 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Desulfuromonadales | Desulfuromonadaceae | Desulfuromonadaceae bacterium | |||
| 29479951 | 29479951 | PRJNA615175_P_NODE_2990_length_899_cov_3.941889_g2854_i0 | PRJNA615175 | 2990 | 899 | 3.941889 | 35.43758211 | Desulfovibrio sp. | 885 | Bacteria | Bacteria | 47.4 | 0.0375 | NR | MCR5813686.1 | 885 | g2854 | i0 | 30.1 | 0.410456062291435 | 123 | 59 | 32 | 4 | 320 | 607 | 121 | 243 | MCR5813686.1 hypothetical protein [Desulfovibrio sp.] | diamond | 369 | 47.4 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | Desulfovibrio sp. | ||
| 30901855 | 30901855 | PRJNA615175_P_NODE_14834_length_367_cov_1.846939_g14666_i0 | PRJNA615175 | 14834 | 367 | 1.846939 | 6.7782661299999996 | Geomonas sp. Red32 | 2912856 | Bacteria | Bacteria | 208 | 3.82e-66 | NR | WP_250676575.1 | 2912856 | g14666 | i0 | 78.3 | 2.95095367847411 | 120 | 26 | 98.1 | 0 | 3 | 362 | 44 | 163 | WP_250676575.1 antibiotic biosynthesis monooxygenase [Geomonas sp. Red32] | diamond | 1083 | 208 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geomonas | Geomonas sp. Red32 | ||
| 31198687 | 31198687 | PRJNA615175_P_NODE_8535_length_510_cov_5.038902_g8367_i0 | PRJNA615175 | 8535 | 510 | 5.038902 | 25.6984002 | Bacteria | 2 | Bacteria | Bacteria | 118 | 3.47e-29 | NR | MEI7638319.1 | 48412 | g8367 | i0 | 56.5 | 1.08235294117647 | 92 | 40 | 54.1 | 0 | 1 | 276 | 166 | 257 | MEI7638319.1 DUF4886 domain-containing protein [Syntrophus sp. (in: bacteria)] | diamond | 552 | 118 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Syntrophia | Syntrophales | Syntrophaceae | Syntrophus | Syntrophus sp. (in: bacteria) | ||
| 31376015 | 31376015 | PRJNA615175_P_NODE_2796_length_928_cov_2.947368_g2664_i0 | PRJNA615175 | 2796 | 928 | 2.947368 | 27.35157504 | Desulfatitalea tepidiphila | 1185843 | Bacteria | Bacteria | 63.2 | 6.84e-7 | NR | WP_054030898.1 | 1185843 | g2664 | i0 | 24.2 | 0.908405172413793 | 281 | 177 | 80.8 | 8 | 175 | 924 | 796 | 1071 | WP_054030898.1 DUF1848 family protein [Desulfatitalea tepidiphila] | diamond | 843 | 63.2 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfosarcinaceae | Desulfatitalea | Desulfatitalea tepidiphila | ||
| 31407639 | 31407639 | PRJNA615175_P_NODE_25616_length_266_cov_3.601036_g25448_i0 | PRJNA615175 | 25616 | 266 | 3.601036 | 9.57875576 | Desulfovibrio sp. | 885 | Bacteria | Bacteria | 60.1 | 3.61e-8 | NR | MBQ9407129.1 | 885 | g25448 | i0 | 41.6 | 0.868421052631579 | 77 | 41 | 82.3 | 2 | 248 | 30 | 252 | 328 | MBQ9407129.1 Flp pilus assembly complex ATPase component TadA [Desulfovibrio sp.] | diamond | 231 | 60.1 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | Desulfovibrio sp. | ||
| 31850278 | 31850278 | PRJNA615175_P_NODE_11857_length_419_cov_1.780347_g11689_i0 | PRJNA615175 | 11857 | 419 | 1.780347 | 7.45965393 | Desulfovibrionaceae bacterium | 2049043 | Bacteria | Bacteria | 94 | 1.38e-19 | NR | MDQ7832064.1 | 2049043 | g11689 | i0 | 71.9 | 0.809069212410501 | 57 | 16 | 40.8 | 0 | 248 | 418 | 3 | 59 | MDQ7832064.1 site-specific DNA-methyltransferase [Desulfovibrionaceae bacterium] | diamond | 339 | 94 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrionaceae bacterium | |||
| 32735655 | 32735655 | PRJNA615175_P_NODE_24760_length_273_cov_1.540000_g24592_i0 | PRJNA615175 | 24760 | 273 | 1.54 | 4.2042 | Desulfovibrionaceae bacterium | 2049043 | Bacteria | Bacteria | 58.2 | 1.21e-7 | NR | MBQ7609139.1 | 2049043 | g24592 | i0 | 42.6 | 0.67032967032967 | 61 | 32 | 67 | 1 | 41 | 223 | 84 | 141 | MBQ7609139.1 endonuclease [Desulfovibrionaceae bacterium] | diamond | 183 | 58.2 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrionaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;