RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA615175", tax_kingdom = "Metazoa" and tax_phylum = "Brachiopoda"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Brachiopoda · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA615175 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26872154 26872154 PRJNA615175_P_NODE_12681_length_401_cov_4.731707_g12513_i0 PRJNA615175 12681 401 4.731707 18.97414507 Metazoa 33208 Brachiopoda other_Eukaryota 181 6.959999999999998e-56   NR XP_013396068.1 7574 g12513 i0 68.5 10.4663341645885 130 41 97.3 0 11 400 1 130 XP_013396068.1 40S ribosomal protein S12-like [Lingula anatina] diamond 4197 181 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
32578184 32578184 PRJNA615175_P_NODE_35799_length_238_cov_2.800000_g35631_i0 PRJNA615175 35799 238 2.8 6.664 Lingula anatina 7574 Brachiopoda other_Eukaryota 84.7 8.81e-18   NR XP_013385789.1 7574 g35631 i0 57.5 2.00420168067227 80 32 98.3 1 234 1 144 223 XP_013385789.1 ribosome maturation protein SBDS [Lingula anatina] diamond 477 84.7 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;