RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA615175", tax_clade = "Stenosarchaea group" and tax_phylum = "Methanobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Methanobacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 3 ✖

bioproject 1

  • PRJNA615175 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13349064 13349064 PRJNA615175_P_NODE_21471_length_298_cov_1.368889_g21303_i0 PRJNA615175 21471 298 1.368889 4.07928922 Halalkalicoccus jeotgali 413810 Archaea Archaea 398 3.0899999999999995e-106   NTclustered gi|299126090|gb|CP002063.1| 795797 g21303 i0 91.379 0.973154362416107 290 25 97 0 1 290 66675 66386 Halalkalicoccus jeotgali B3 plasmid 1, complete sequence blastn 290 398 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus jeotgali
19001188 19001188 PRJNA615175_P_NODE_10595_length_449_cov_2.109043_g10427_i0 PRJNA615175 10595 449 2.109043 9.46960307 Halobellus 1073986 Archaea Archaea 135 4.2e-34   NR WP_049986121.1 1448860 g10427 i0 50.7 2.96659242761693 148 69 98.9 3 6 449 361 504 WP_049986121.1 GMC family oxidoreductase [Halobellus rufus] diamond 1332 135 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halobellus Halobellus rufus
32053142 32053142 PRJNA615175_P_NODE_6498_length_597_cov_3.007634_g6333_i0 PRJNA615175 6498 597 3.007634 17.95557498 root 1 Root_unresolved Root_unresolved 53.1 2.57e-4   NR WP_292729902.1 90427 g6333 i0 39.7 3.49748743718593 78 38 38.2 3 351 124 312 382 WP_292729902.1 NosD domain-containing protein, partial [Methanoculleus sp.] diamond 2088 53.5 0.992523364485981 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanoculleus Methanoculleus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;