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contig_metadata

7 rows where bioproject = "PRJNA615175", tax_clade = "Sar" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA615175 · 7 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
595217 595217 PRJNA615175_P_NODE_601_length_1662_cov_42.727502_g552_i0 PRJNA615175 601 1662 42.727502 710.13108324 Rosculus incognitus 2231162 SAR_Eukaryotes SAR_Eukaryotes 1057 0   NTclustered gi|1402550483|gb|MH488769.1| 2231162 g552 i0 79.334 34.2394705174489 1621 247 95 68 42 1626 1581 13 Rosculus incognitus isolate ATCC 50577 small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 56906 1057 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus incognitus
9523318 9523318 PRJNA615175_P_NODE_21688_length_296_cov_1.986547_g21520_i0 PRJNA615175 21688 296 1.986547 5.88017912 Rosculus sp. 2231160 SAR_Eukaryotes SAR_Eukaryotes 477 3.829999999999998e-130   NTclustered gi|1402550473|gb|MH488759.1| 2231160 g21520 i0 100 4.53040540540541 258 0 87 0 1 258 316 573 Rosculus sp. isolate CSA small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 1341 477 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus sp.
10799317 10799317 PRJNA615175_P_NODE_31229_length_246_cov_3.445087_g31061_i0 PRJNA615175 31229 246 3.445087 8.47491402 Rosculus sp. 2231160 SAR_Eukaryotes SAR_Eukaryotes 455 1.4500000000000002e-123   NTclustered gi|1402550476|gb|MH488762.1| 2231160 g31061 i0 100 34.9471544715447 246 0 100 0 1 246 1098 853 Rosculus sp. isolate CCAC3 small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 8597 455 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus sp.
11353257 11353257 PRJNA615175_P_NODE_449_length_1806_cov_91.416619_g410_i0 PRJNA615175 449 1806 91.416619 1650.98413914 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 200 6.28e-46   NTclustered gi|290760489|gb|GQ144692.1| 629764 g410 i0 83.721 9.45791805094131 215 32 19 3 487 701 1245 1456 Cercozoa sp. CC-2009f large subunit ribosomal RNA gene, partial sequence blastn 17081 202 0.99009900990099 Eukaryota Sar   Cercozoa Thecofilosea Ventricleftida   Verrucomonas Verrucomonas longifila
15897853 15897853 PRJNA615175_P_NODE_25373_length_268_cov_2.687179_g25205_i0 PRJNA615175 25373 268 2.687179 7.20163972 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 390 4.579999999999999e-104   NTclustered gi|238617605|gb|FJ973380.1| 45107 g25205 i0 92.91 99.9179104477612 268 19 100 0 1 268 1589 1322 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 26778 390 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
18447017 18447017 PRJNA615175_P_NODE_2855_length_918_cov_24.102959_g2722_i0 PRJNA615175 2855 918 24.102959 221.26516362 Rosculus vulgaris 2231165 SAR_Eukaryotes SAR_Eukaryotes 516 2.74e-141   NTclustered gi|1402550474|gb|MH488760.1| 2231165 g2722 i0 83.22 20.0196078431373 590 72 64 17 28 612 2200 2767 Rosculus vulgaris isolate CCA sequence blastn 18378 516 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus vulgaris
21551757 21551757 PRJNA615175_P_NODE_5937_length_627_cov_4.189531_g5772_i0 PRJNA615175 5937 627 4.189531 26.26835937 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 106 4.71e-18   NTclustered gi|88792586|gb|DQ386167.1| 188980 g5772 i0 93.056 11.430622009569401 72 5 11 0 70 141 1492 1563 Thaumatomastix sp. ATCC 50250 28S ribosomal RNA gene, partial sequence blastn 7167 106 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida Thaumatomastigidae Thaumatomastix Thaumatomastix sp. ATCC 50250

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;