RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

17 rows where bioproject = "PRJNA615175", tax_clade = "Opisthokonta" and tax_phylum = "Rotifera"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Rotifera · 17 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 17 ✖

bioproject 1

  • PRJNA615175 · 17 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26681707 26681707 PRJNA615175_P_NODE_4321_length_746_cov_3.384844_g4162_i0 PRJNA615175 4321 746 3.384844 25.25093624 root 1 Root_unresolved Root_unresolved 51.2 0.00199   NR CAF0765523.1 104777 g4162 i0 51.2 1.34718498659517 43 21 17.3 0 34 162 298 340 CAF0765523.1 unnamed protein product [Brachionus calyciflorus] diamond 1005 51.6 0.992248062015504 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
27901384 27901384 PRJNA615175_P_NODE_27685_length_251_cov_1.651685_g27517_i0 PRJNA615175 27685 251 1.651685 4.14572935 Adineta ricciae 249248 Rotifera other_Eukaryota 50.1 6.03e-5   NR CAF1160447.1 249248 g27517 i0 35.5 2.8207171314741 62 38 71.7 1 250 71 106 167 CAF1160447.1 unnamed protein product [Adineta ricciae] diamond 708 50.1 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
27964633 27964633 PRJNA615175_P_NODE_1445_length_1230_cov_8.922213_g1350_i0 PRJNA615175 1445 1230 8.922213 109.7432199 Adineta ricciae 249248 Rotifera other_Eukaryota 294 1.63e-91   NR CAF0783990.1 249248 g1350 i0 39.6 9.27317073170732 442 220 98.8 11 14 1228 18 449 CAF0783990.1 unnamed protein product [Adineta ricciae] diamond 11406 294 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
28388109 28388109 PRJNA615175_P_NODE_4946_length_694_cov_5.632850_g4784_i0 PRJNA615175 4946 694 5.63285 39.091979 Eurotatoria 2816136 Rotifera other_Eukaryota 169 1.1999999999999998e-48   NR CAF3718238.1 392032 g4784 i0 47.8 6.09942363112392 205 96 84.3 4 694 110 9 212 CAF3718238.1 unnamed protein product [Rotaria socialis] diamond 4233 169 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria socialis
28564656 28564656 PRJNA615175_P_NODE_147_length_2509_cov_3.137931_g133_i0 PRJNA615175 147 2509 3.137931 78.73068879 Didymodactylos carnosus 1234261 Rotifera other_Eukaryota 498 1.8699999999999993e-159   NR CAF1046807.1 1234261 g133 i0 37.3 0.993622957353527 831 432 98.4 13 2506 38 60 809 CAF1046807.1 unnamed protein product [Didymodactylos carnosus] diamond 2493 498 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Didymodactylos Didymodactylos carnosus
29133120 29133120 PRJNA615175_P_NODE_12649_length_402_cov_1.899696_g12481_i0 PRJNA615175 12649 402 1.899696 7.63677792 Didymodactylos carnosus 1234261 Rotifera other_Eukaryota 54.7 1.38e-5   NR CAF0983132.1 1234261 g12481 i0 30.5 0.783582089552239 105 60 73.1 4 297 4 407 505 CAF0983132.1 unnamed protein product [Didymodactylos carnosus] diamond 315 54.7 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Didymodactylos Didymodactylos carnosus
29322301 29322301 PRJNA615175_P_NODE_9529_length_477_cov_3.727723_g9361_i0 PRJNA615175 9529 477 3.727723 17.78123871 Adineta steineri 433720 Rotifera other_Eukaryota 160 2.8899999999999995e-42   NR CAF0968545.1 433720 g9361 i0 57.6 4.78616352201258 125 53 78.6 0 75 449 573 697 CAF0968545.1 unnamed protein product [Adineta steineri] diamond 2283 160 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta steineri
29511722 29511722 PRJNA615175_P_NODE_3910_length_787_cov_2.771709_g3758_i0 PRJNA615175 3910 787 2.771709 21.81334983 Philodina roseola 96448 Rotifera other_Eukaryota 113 3.03e-25   NR ACC43943.1 96448 g3758 i0 46.9 2.09656925031766 130 61 46.9 4 781 413 48 176 ACC43943.1 unknown [Philodina roseola] diamond 1650 113 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
30187998 30187998 PRJNA615175_P_NODE_3852_length_792_cov_17.777469_g3701_i0 PRJNA615175 3852 792 17.777469 140.79755448 Eurotatoria 2816136 Rotifera other_Eukaryota 421 1.5199999999999999e-146   NR CAF0784306.1 249248 g3701 i0 77.5 3.94318181818182 262 56 98.9 2 4 786 1 260 CAF0784306.1 unnamed protein product [Adineta ricciae] diamond 3123 421 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
30491096 30491096 PRJNA615175_P_NODE_17453_length_335_cov_1.763359_g17285_i0 PRJNA615175 17453 335 1.763359 5.90725265 Adineta vaga 104782 Rotifera other_Eukaryota 55.8 2.77e-6   NR UJR31889.1 104782 g17285 i0 83.3 0.322388059701493 36 6 32.2 0 271 164 128 163 UJR31889.1 hypothetical protein I4U23_019363 [Adineta vaga] diamond 108 55.8 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
31009541 31009541 PRJNA615175_P_NODE_18254_length_327_cov_1.590551_g18086_i0 PRJNA615175 18254 327 1.590551 5.20110177 Philodinidae 44580 Rotifera other_Eukaryota 104 2.78e-26   NR CAF0831253.1 392033 g18086 i0 57.4 2.65137614678899 94 36 83.5 3 46 318 1 93 CAF0831253.1 unnamed protein product [Rotaria sordida] diamond 867 105 0.990476190476191 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sordida
31198685 31198685 PRJNA615175_P_NODE_10055_length_463_cov_1.953846_g9887_i0 PRJNA615175 10055 463 1.953846 9.04630698 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 141 1.81e-37   NR CAF0719324.1 433720 g9887 i0 49.7 2.81857451403888 145 68 94 2 439 5 199 338 CAF0719324.1 unnamed protein product [Adineta steineri] diamond 1305 141 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta steineri
31755413 31755413 PRJNA615175_P_NODE_4417_length_737_cov_4.137048_g4258_i0 PRJNA615175 4417 737 4.137048 30.49004376 Adineta steineri 433720 Rotifera other_Eukaryota 142 1.1599999999999999e-34   NR CAF0968545.1 433720 g4258 i0 60.7 1.36770691994573 112 42 44.8 1 409 80 647 758 CAF0968545.1 unnamed protein product [Adineta steineri] diamond 1008 142 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta steineri
32103410 32103410 PRJNA615175_P_NODE_16598_length_345_cov_1.647059_g16430_i0 PRJNA615175 16598 345 1.647059 5.68235355 Didymodactylos carnosus 1234261 Rotifera other_Eukaryota 44.3 0.0228   NR CAF0918673.1 1234261 g16430 i0 32.9 0.634782608695652 73 47 61.7 2 339 127 127 199 CAF0918673.1 unnamed protein product [Didymodactylos carnosus] diamond 219 44.3 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Didymodactylos Didymodactylos carnosus
32166946 32166946 PRJNA615175_P_NODE_4518_length_728_cov_10.691603_g4358_i0 PRJNA615175 4518 728 10.691603 77.83486984 Rotaria sordida 392033 Rotifera other_Eukaryota 119 4.83e-28   NR CAF1137414.1 392033 g4358 i0 31.8 4.45054945054945 211 119 77.9 4 114 680 54 261 CAF1137414.1 unnamed protein product [Rotaria sordida] diamond 3240 119 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sordida
32356869 32356869 PRJNA615175_P_NODE_979_length_1432_cov_4.034584_g905_i0 PRJNA615175 979 1432 4.034584 57.77524288 Rotaria sp. Silwood1 2762511 Rotifera other_Eukaryota 487 6.369999999999999e-151   NR CAF3709489.1 2762511 g905 i0 52.5 10.3282122905028 493 216 99.7 2 2 1429 2373 2864 CAF3709489.1 unnamed protein product [Rotaria sp. Silwood1] diamond 14790 487 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sp. Silwood1
32419974 32419974 PRJNA615175_P_NODE_3999_length_778_cov_3.740426_g3843_i0 PRJNA615175 3999 778 3.740426 29.10051428 Rotaria sp. Silwood2 2762512 Rotifera other_Eukaryota 119 7.13e-28   NR CAF2838268.1 2762512 g3843 i0 31.8 5.9305912596401 255 148 95.6 9 746 3 53 288 CAF2838268.1 unnamed protein product [Rotaria sp. Silwood2] diamond 4614 119 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sp. Silwood2

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;