RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA615175", tax_clade = "Metamonada" and tax_phylum = "Preaxostyla"

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tax_superkingdom 1

tax_phylum 1

  • Preaxostyla · 2 ✖

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJNA615175 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28230010 28230010 PRJNA615175_P_NODE_35746_length_240_cov_2.766467_g35578_i0 PRJNA615175 35746 240 2.766467 6.6395208 root 1 Root_unresolved Root_unresolved 80.9 9.42e-16   NR KAK2960860.1 2049346 g35578 i0 54.8 3.75 73 31 88.8 1 19 231 283 355 KAK2960860.1 putative Actin [Blattamonas nauphoetae] diamond 900 81.6 0.991421568627451 Eukaryota Metamonada   Preaxostyla   Oxymonadida   Blattamonas Blattamonas nauphoetae
31502630 31502630 PRJNA615175_P_NODE_8896_length_498_cov_5.696471_g8728_i0 PRJNA615175 8896 498 5.696471 28.36842558 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 63.2 3.55e-8   NR KAJ4460834.1 342808 g8728 i0 28.6 3.77710843373494 154 102 92.8 4 2 463 302 447 KAJ4460834.1 putative Protein CLP1 [Paratrimastix pyriformis] diamond 1881 63.2 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;