RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA615175", tax_clade = "FCB group" and tax_phylum = "Ignavibacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA615175 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22272383 22272383 PRJNA615175_P_NODE_6678_length_587_cov_46.291829_g6513_i0 PRJNA615175 6678 587 46.291829 271.73303623 Melioribacteraceae bacterium 2614255 Bacteria Bacteria 126 3.37e-24   NTclustered gi|2621786307|emb|OY782765.1| 2614255 g6513 i0 72.805 28.5894378194208 467 91 77 32 138 587 2845936 2845489 MAG: Melioribacteraceae bacterium isolate b49f5fa7-6043-4eb4-88a3-53a29b1f0925 genome assembly, chromosome: 1 blastn 16782 126 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Melioribacteraceae   Melioribacteraceae bacterium
28911648 28911648 PRJNA615175_P_NODE_3488_length_833_cov_3.048684_g3341_i0 PRJNA615175 3488 833 3.048684 25.39553772 Ignavibacteria bacterium 2053306 Bacteria Bacteria 124 1.54e-28   NR NLT50021.1 2053306 g3341 i0 36.3 0.853541416566627 237 130 81.8 6 141 821 41 266 NLT50021.1 T9SS type A sorting domain-containing protein [Ignavibacteria bacterium] diamond 711 124 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
30428264 30428264 PRJNA615175_P_NODE_26113_length_263_cov_1.421053_g25945_i0 PRJNA615175 26113 263 1.421053 3.73736939 Ignavibacteriota bacterium 2026749 Bacteria Bacteria 107 8.3e-25   NR MCX6158979.1 2026749 g25945 i0 66.7 1.98479087452471 87 27 97 1 9 263 460 546 MCX6158979.1 ATP-binding protein [Ignavibacteriota bacterium] diamond 522 107 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;