contig_metadata
4 rows where bioproject = "PRJNA615175", tax_clade = "FCB group" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 20997148 | 20997148 | PRJNA615175_P_NODE_20377_length_307_cov_2.350427_g20209_i0 | PRJNA615175 | 20377 | 307 | 2.350427 | 7.21581089 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 285 | 2.5899999999999997e-72 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g20209 | i0 | 84.806 | 134.071661237785 | 283 | 43 | 92 | 0 | 2 | 284 | 1903241 | 1902959 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 41160 | 285 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 28261698 | 28261698 | PRJNA615175_P_NODE_6686_length_587_cov_5.184825_g6521_i0 | PRJNA615175 | 6686 | 587 | 5.184825 | 30.43492275 | root | 1 | Root_unresolved | Root_unresolved | 109 | 3.54e-25 | NR | HET7621048.1 | 2026741 | g6521 | i0 | 35 | 3.17376490630324 | 203 | 116 | 99.7 | 7 | 586 | 2 | 69 | 263 | HET7621048.1 endonuclease/exonuclease/phosphatase family protein [Gemmatimonadaceae bacterium] | diamond | 1863 | 109 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 29619167 | 29619167 | PRJNA615175_P_NODE_13710_length_384_cov_1.980707_g13542_i0 | PRJNA615175 | 13710 | 384 | 1.980707 | 7.60591488 | FCB group | 1783270 | Bacteria | Bacteria | 46.6 | 0.00687 | NR | MCK5438892.1 | 2026742 | g13542 | i0 | 37.7 | 3.2890625 | 61 | 34 | 47.7 | 1 | 70 | 252 | 249 | 305 | MCK5438892.1 NAD-dependent epimerase/dehydratase family protein [Gemmatimonadota bacterium] | diamond | 1263 | 47 | 0.991489361702128 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 31660391 | 31660391 | PRJNA615175_P_NODE_9177_length_489_cov_4.204327_g9009_i0 | PRJNA615175 | 9177 | 489 | 4.204327 | 20.55915903 | Roseisolibacter agri | 2014610 | Bacteria | Bacteria | 61.6 | 1.19e-7 | NR | WP_284352627.1 | 2014610 | g9009 | i0 | 31.9 | 0.693251533742331 | 113 | 60 | 69.3 | 1 | 4 | 342 | 114 | 209 | WP_284352627.1 transposase [Roseisolibacter agri] | diamond | 339 | 61.6 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Roseisolibacter | Roseisolibacter agri |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;