RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA615175" and tax_clade = "Apusozoa"

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tax_superkingdom 1

tax_clade 1

  • Apusozoa · 2 ✖

bioproject 1

  • PRJNA615175 · 2 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27269901 27269901 PRJNA615175_P_NODE_4203_length_756_cov_5.273792_g4045_i0 PRJNA615175 4203 756 5.273792 39.86986752 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 243 1.0199999999999999e-74   NR XP_013752795.1 461836 g4045 i0 49.8 2.61507936507937 219 110 86.9 0 660 4 176 394 XP_013752795.1 cycloartenol-C-24-methyltransferase [Thecamonas trahens ATCC 50062] diamond 1977 243 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
28861672 28861672 PRJNA615175_P_NODE_2448_length_984_cov_7.927552_g2324_i0 PRJNA615175 2448 984 7.927552 78.00711168 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 291 9.93e-92   NR XP_013757797.1 461836 g2324 i0 52.1 2.65243902439024 286 131 85.7 4 955 113 93 377 XP_013757797.1 beta-lactamase [Thecamonas trahens ATCC 50062] diamond 2610 292 0.996575342465753 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;