RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA613025", tax_phylum = "Peploviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

  • Peploviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA613025 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1867602 1867602 PRJNA613025_S_NODE_17282_length_247_cov_1.540404_g17128_i0 PRJNA613025 17282 247 1.540404 3.80479788 Lymphocryptovirus humangamma4 3050299 Viruses Viruses 62.1 3.71e-5   NTclustered gi|1465382783|emb|LS992247.1| 10376 g17128 i0 100 14.7813765182186 33 0 13 0 215 247 58056 58024 Human gammaherpesvirus 4 isolate Human herpesvirus 4 genome assembly, chromosome: I blastn 3651 62.1 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
22268754 22268754 PRJNA613025_S_NODE_15578_length_270_cov_2.004525_g15424_i0 PRJNA613025 15578 270 2.004525 5.4122175 Percavirus equidgamma2 3050281 Viruses Viruses 499 7.349999999999998e-137   NTclustered gi|2271301500|gb|MW322569.1| 12657 g15424 i0 100 28.0111111111111 270 0 100 0 1 270 104213 103944 Equid gammaherpesvirus 2 strain 1-141/67, complete genome blastn 7563 499 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Percavirus Percavirus equidgamma2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;