RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA613025" and tax_phylum = "Negarnaviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Negarnaviricota · 6 ✖

tax_kingdom 1

bioproject 1

  • PRJNA613025 · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5695227 5695227 PRJNA613025_S_NODE_18005_length_239_cov_0.900000_g17851_i0 PRJNA613025 18005 239 0.9 2.151 Artemvirus bsafialis 3426459 Viruses Viruses 442 1.0899999999999994e-119   NTclustered gi|2209095102|gb|OL472401.1| 2900376 g17851 i0 100 15 239 0 100 0 1 239 2183 1945 MAG: Brine shrimp arlivirus 1 isolate GSL/15 hypothetical protein and RNA-dependent RNA polymerase genes, complete cds blastn 3585 442 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Lispiviridae Artemvirus Artemvirus bsafialis
5695498 5695498 PRJNA613025_S_NODE_30345_length_167_cov_0.864407_g30191_i0 PRJNA613025 30345 167 0.864407 1.44355969 Artemvirus bsafialis 3426459 Viruses Viruses 309 7.53e-80   NTclustered gi|2209095102|gb|OL472401.1| 2900376 g30191 i0 100 15 167 0 100 0 1 167 8199 8365 MAG: Brine shrimp arlivirus 1 isolate GSL/15 hypothetical protein and RNA-dependent RNA polymerase genes, complete cds blastn 2505 309 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Lispiviridae Artemvirus Artemvirus bsafialis
10796203 10796203 PRJNA613025_S_NODE_30769_length_166_cov_0.871795_g30615_i0 PRJNA613025 30769 166 0.871795 1.4471797 Artemvirus bsafialis 3426459 Viruses Viruses 296 5.82e-76   NTclustered gi|2209095102|gb|OL472401.1| 2900376 g30615 i0 99.387 14.7289156626506 163 1 98 0 1 163 5592 5754 MAG: Brine shrimp arlivirus 1 isolate GSL/15 hypothetical protein and RNA-dependent RNA polymerase genes, complete cds blastn 2445 296 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Lispiviridae Artemvirus Artemvirus bsafialis
15894714 15894714 PRJNA613025_S_NODE_22433_length_203_cov_1.220779_g22279_i0 PRJNA613025 22433 203 1.220779 2.47818137 Artemvirus bsafialis 3426459 Viruses Viruses 361 2.5899999999999994e-95   NTclustered gi|2209095090|gb|OL472399.1| 2900376 g22279 i0 99.005 14.8522167487685 201 2 99 0 2 202 9130 8930 MAG: Brine shrimp arlivirus 1 isolate SD/10-12 hypothetical protein and RNA-dependent RNA polymerase genes, complete cds blastn 3015 361 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Lispiviridae Artemvirus Artemvirus bsafialis
24818249 24818249 PRJNA613025_S_NODE_32740_length_163_cov_0.894737_g32586_i0 PRJNA613025 32740 163 0.894737 1.45842131 Artemvirus bsafialis 3426459 Viruses Viruses 302 1.22e-77   NTclustered gi|2209095102|gb|OL472401.1| 2900376 g32586 i0 100 15 163 0 100 0 1 163 1327 1489 MAG: Brine shrimp arlivirus 1 isolate GSL/15 hypothetical protein and RNA-dependent RNA polymerase genes, complete cds blastn 2445 302 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Lispiviridae Artemvirus Artemvirus bsafialis
32748419 32748419 PRJNA613025_S_NODE_32640_length_163_cov_0.894737_g32486_i0 PRJNA613025 32640 163 0.894737 1.45842131 Chuvivirus 2842604 Viruses Viruses 82.8 9.1e-17   NR WET19887.1 2842604 g32486 i0 70.4 2.98159509202454 54 16 99.4 0 2 163 303 356 WET19887.1 MAG: nucleoprotein [Freshwater turtle neural virus 1] diamond 486 82.8 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Chuvivirus Chuvivirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;