contig_metadata
26 rows where bioproject = "PRJNA613025" and tax_phylum = "Myxococcota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 591762 | 591762 | PRJNA613025_S_NODE_21461_length_209_cov_1.306250_g21307_i0 | PRJNA613025 | 21461 | 209 | 1.30625 | 2.7300625 | Archangium gephyra | 48 | Bacteria | Bacteria | 198 | 2.22e-46 | NTclustered | gi|2809295724|gb|CP102578.1| | 48 | g21307 | i0 | 83.81 | 8.94258373205742 | 210 | 32 | 100 | 2 | 1 | 209 | 11234695 | 11234487 | Archangium gephyra strain SDU49 chromosome, complete genome | blastn | 1869 | 198 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium gephyra | ||
| 1867515 | 1867515 | PRJNA613025_S_NODE_13962_length_297_cov_2.064516_g13808_i0 | PRJNA613025 | 13962 | 297 | 2.064516 | 6.13161252 | Pendulispora rubella | 2741070 | Bacteria | Bacteria | 398 | 3.0799999999999996e-106 | NTclustered | gi|2698045512|gb|CP089929.1| | 2741070 | g13808 | i0 | 91.468 | 156.057239057239 | 293 | 20 | 98 | 3 | 6 | 297 | 7289487 | 7289199 | Pendulispora rubella strain MSr11368 chromosome, complete genome | blastn | 46349 | 398 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Pendulisporaceae | Pendulispora | Pendulispora rubella | ||
| 3142676 | 3142676 | PRJNA613025_S_NODE_24503_length_191_cov_1.429577_g24349_i0 | PRJNA613025 | 24503 | 191 | 1.429577 | 2.73049207 | Anaeromyxobacter paludicola | 2918171 | Bacteria | Bacteria | 309 | 8.83e-80 | NTclustered | gi|2199271117|dbj|AP025592.1| | 2918171 | g24349 | i0 | 96.277 | 227.366492146597 | 188 | 7 | 100 | 0 | 1 | 188 | 1384087 | 1384274 | Anaeromyxobacter paludicola DNA, complete genome | blastn | 43427 | 309 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Anaeromyxobacteraceae | Anaeromyxobacter | Anaeromyxobacter paludicola | ||
| 4419278 | 4419278 | PRJNA613025_S_NODE_20224_length_218_cov_1.295858_g20070_i0 | PRJNA613025 | 20224 | 218 | 1.295858 | 2.82497044 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 300 | 6.23e-77 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g20070 | i0 | 91.364 | 120.912844036697 | 220 | 17 | 100 | 2 | 1 | 218 | 3942549 | 3942330 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 26359 | 300 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 5695046 | 5695046 | PRJNA613025_S_NODE_10385_length_382_cov_4.303303_g10232_i0 | PRJNA613025 | 10385 | 382 | 4.303303 | 16.43861746 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 442 | 1.8499999999999992e-119 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g10232 | i0 | 89.518 | 132.361256544503 | 353 | 31 | 97 | 5 | 1 | 350 | 3942261 | 3941912 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 50562 | 442 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 5695191 | 5695191 | PRJNA613025_S_NODE_16065_length_262_cov_3.643192_g15911_i0 | PRJNA613025 | 16065 | 262 | 3.643192 | 9.54516304 | Pendulispora albinea | 2741071 | Bacteria | Bacteria | 235 | 2.21e-57 | NTclustered | gi|2698035964|gb|CP089984.1| | 2741071 | g15911 | i0 | 83.083 | 162.36641221374 | 266 | 38 | 100 | 7 | 1 | 262 | 3590700 | 3590438 | Pendulispora albinea strain MSr11954 chromosome, complete genome | blastn | 42540 | 235 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Pendulisporaceae | Pendulispora | Pendulispora albinea | ||
| 5695543 | 5695543 | PRJNA613025_S_NODE_32505_length_163_cov_0.894737_g32351_i0 | PRJNA613025 | 32505 | 163 | 0.894737 | 1.45842131 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 75.1 | 4.88e-14 | NR | MBK6693411.1 | 2026763 | g32351 | i0 | 64.8 | 0.993865030674847 | 54 | 19 | 99.4 | 0 | 162 | 1 | 371 | 424 | MBK6693411.1 HAMP domain-containing histidine kinase [Myxococcales bacterium] | diamond | 162 | 75.1 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 6969838 | 6969838 | PRJNA613025_S_NODE_10806_length_369_cov_251.712500_g10652_i0 | PRJNA613025 | 10806 | 369 | 251.7125 | 928.819125 | Pajaroellobacter abortibovis | 1882918 | Bacteria | Bacteria | 532 | 1.03e-146 | NTclustered | gi|1127377833|gb|CP016908.1| | 1882918 | g10652 | i0 | 92.683 | 264.130081300813 | 369 | 27 | 100 | 0 | 1 | 369 | 1549408 | 1549776 | Pajaroellobacter abortibovis strain BTF92-0548A/99-0131, genome | blastn | 97464 | 532 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Pajaroellobacter | Pajaroellobacter abortibovis | |||
| 8245153 | 8245153 | PRJNA613025_S_NODE_4447_length_749_cov_14.291429_g4310_i0 | PRJNA613025 | 4447 | 749 | 14.291429 | 107.04280321 | Pendulispora albinea | 2741071 | Bacteria | Bacteria | 850 | 0 | NTclustered | gi|2698035964|gb|CP089984.1| | 2741071 | g4310 | i0 | 88.154 | 120.524699599466 | 726 | 70 | 96 | 13 | 3 | 719 | 3589475 | 3588757 | Pendulispora albinea strain MSr11954 chromosome, complete genome | blastn | 90273 | 850 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Pendulisporaceae | Pendulispora | Pendulispora albinea | ||
| 8801659 | 8801659 | PRJNA613025_S_NODE_19207_length_227_cov_1.146067_g19053_i0 | PRJNA613025 | 19207 | 227 | 1.146067 | 2.60157209 | Anaeromyxobacter | 161492 | Bacteria | Bacteria | 300 | 6.54e-77 | NTclustered | gi|470477744|ref|NR_076406.1| | 161493 | g19053 | i0 | 90.393 | 229.757709251101 | 229 | 20 | 100 | 2 | 1 | 227 | 650 | 422 | Anaeromyxobacter dehalogenans strain 2CP-C 23S ribosomal RNA gene, complete sequence | blastn | 52155 | 300 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Anaeromyxobacteraceae | Anaeromyxobacter | Anaeromyxobacter dehalogenans | ||
| 9520327 | 9520327 | PRJNA613025_S_NODE_33448_length_161_cov_6.169643_g33294_i0 | PRJNA613025 | 33448 | 161 | 6.169643 | 9.93312523 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 287 | 3.37e-73 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g33294 | i0 | 99.367 | 154.534161490683 | 158 | 1 | 98 | 0 | 4 | 161 | 3942821 | 3942664 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 24880 | 287 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 10077307 | 10077307 | PRJNA613025_S_NODE_27028_length_179_cov_1.169231_g26874_i0 | PRJNA613025 | 27028 | 179 | 1.169231 | 2.09292349 | Myxococcales | 29 | Bacteria | Bacteria | 246 | 6.48e-61 | NTclustered | gi|2579687829|gb|CP043494.1| | 83450 | g26874 | i0 | 92.442 | 249.893854748603 | 172 | 13 | 96 | 0 | 1 | 172 | 5101123 | 5100952 | Archangium minus strain Cbm 6 chromosome, complete genome | blastn | 44731 | 246 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium minus | ||
| 10077322 | 10077322 | PRJNA613025_S_NODE_28668_length_172_cov_1.243902_g28514_i0 | PRJNA613025 | 28668 | 172 | 1.243902 | 2.13951144 | Myxococcales | 29 | Bacteria | Bacteria | 257 | 2.85e-64 | NTclustered | gi|545790941|gb|KF270704.1| | 35 | g28514 | i0 | 94.083 | 247.075581395349 | 169 | 10 | 98 | 0 | 1 | 169 | 583 | 751 | Corallococcus macrosporus strain Ccm7 23S ribosomal RNA gene, partial sequence | blastn | 42497 | 257 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Corallococcus | Corallococcus macrosporus | ||
| 10795909 | 10795909 | PRJNA613025_S_NODE_18509_length_233_cov_5.070652_g18355_i0 | PRJNA613025 | 18509 | 233 | 5.070652 | 11.81461916 | Sandaracinus amylolyticus | 927083 | Bacteria | Bacteria | 281 | 2.44e-71 | NTclustered | gi|2183633570|gb|CP070225.1| | 927083 | g18355 | i0 | 88.559 | 121.055793991416 | 236 | 22 | 99 | 5 | 2 | 233 | 9677929 | 9677695 | Sandaracinus strain MSr10575 (SBSa001) chromosome, complete sequence | blastn | 28206 | 281 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Sandaracinaceae | Sandaracinus | Sandaracinus amylolyticus | |||
| 11352214 | 11352214 | PRJNA613025_S_NODE_19289_length_226_cov_1.864407_g19135_i0 | PRJNA613025 | 19289 | 226 | 1.864407 | 4.21355982 | Myxococcus | 32 | Bacteria | Bacteria | 135 | 1.9400000000000003e-27 | NTclustered | gi|2318731907|gb|CP104804.1| | 34 | g19135 | i0 | 81.548 | 8.56194690265487 | 168 | 28 | 74 | 3 | 7 | 173 | 561018 | 561183 | Myxococcus xanthus strain DK1050 chromosome | blastn | 1935 | 135 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Myxococcus | Myxococcus xanthus | ||
| 11352265 | 11352265 | PRJNA613025_S_NODE_26129_length_183_cov_1.126866_g25975_i0 | PRJNA613025 | 26129 | 183 | 1.126866 | 2.06216478 | Polyangiaceae | 49 | Bacteria | Bacteria | 207 | 3.14e-49 | NTclustered | gi|1566478966|gb|CP012672.1| | 56 | g25975 | i0 | 87.027 | 177.693989071038 | 185 | 22 | 100 | 2 | 1 | 183 | 3690925 | 3690741 | Sorangium cellulosum strain So ce836 chromosome, complete genome | blastn | 32518 | 207 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum | |||
| 12070860 | 12070860 | PRJNA613025_S_NODE_11370_length_354_cov_2.078689_g11216_i0 | PRJNA613025 | 11370 | 354 | 2.078689 | 7.35855906 | Cystobacter fuscus | 43 | Bacteria | Bacteria | 444 | 4.73e-120 | NTclustered | gi|1243034522|gb|CP022098.1| | 43 | g11216 | i0 | 89.855 | 99.5197740112994 | 345 | 35 | 97 | 0 | 7 | 351 | 8623845 | 8623501 | Cystobacter fuscus strain DSM 52655 chromosome, complete genome | blastn | 35230 | 444 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Cystobacter | Cystobacter fuscus | ||
| 13345653 | 13345653 | PRJNA613025_S_NODE_14151_length_293_cov_190.397541_g13997_i0 | PRJNA613025 | 14151 | 293 | 190.397541 | 557.86479513 | Sandaracinus amylolyticus | 927083 | Bacteria | Bacteria | 392 | 1.41e-104 | NTclustered | gi|816953346|gb|CP011125.1| | 927083 | g13997 | i0 | 90.785 | 187.109215017065 | 293 | 27 | 100 | 0 | 1 | 293 | 8617077 | 8616785 | Sandaracinus amylolyticus strain DSM 53668, complete genome | blastn | 54823 | 392 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Sandaracinaceae | Sandaracinus | Sandaracinus amylolyticus | |||
| 13345736 | 13345736 | PRJNA613025_S_NODE_17231_length_247_cov_2.873737_g17077_i0 | PRJNA613025 | 17231 | 247 | 2.873737 | 7.09813039 | uncultured Polyangiaceae bacterium | 417999 | Bacteria | Bacteria | 436 | 5.279999999999999e-118 | NTclustered | gi|545342541|gb|KF505773.1| | 417999 | g17077 | i0 | 98.394 | 99.2712550607287 | 249 | 2 | 100 | 2 | 1 | 247 | 494 | 246 | Uncultured Polyangiaceae bacterium clone 5257 16S ribosomal RNA gene, partial sequence | blastn | 24520 | 436 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | uncultured Polyangiaceae bacterium | ||||
| 18443870 | 18443870 | PRJNA613025_S_NODE_24935_length_189_cov_0.842857_g24781_i0 | PRJNA613025 | 24935 | 189 | 0.842857 | 1.59299973 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 189 | 1.1799999999999999e-43 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g24781 | i0 | 85.106 | 414.047619047619 | 188 | 25 | 98 | 3 | 1 | 186 | 3941843 | 3942029 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 78255 | 189 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 29164736 | 29164736 | PRJNA613025_S_NODE_23409_length_197_cov_1.371622_g23255_i0 | PRJNA613025 | 23409 | 197 | 1.371622 | 2.70209534 | Polyangiaceae bacterium | 2268199 | Bacteria | Bacteria | 46.2 | 8.89e-4 | NR | HEX7665424.1 | 2268199 | g23255 | i0 | 36.9 | 1.97969543147208 | 65 | 40 | 99 | 1 | 2 | 196 | 92 | 155 | HEX7665424.1 glutathione binding-like protein [Polyangiaceae bacterium] | diamond | 390 | 46.2 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangiaceae bacterium | ||||
| 29448400 | 29448400 | PRJNA613025_S_NODE_30730_length_166_cov_0.871795_g30576_i0 | PRJNA613025 | 30730 | 166 | 0.871795 | 1.4471797 | Polyangiaceae bacterium | 2268199 | Bacteria | Bacteria | 43.1 | 0.00948 | NR | MEZ4306608.1 | 2268199 | g30576 | i0 | 86.4 | 0.397590361445783 | 22 | 3 | 39.8 | 0 | 99 | 164 | 358 | 379 | MEZ4306608.1 protein kinase [Polyangiaceae bacterium] | diamond | 66 | 43.1 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangiaceae bacterium | ||||
| 30206400 | 30206400 | PRJNA613025_S_NODE_32352_length_163_cov_1.473684_g32198_i0 | PRJNA613025 | 32352 | 163 | 1.473684 | 2.40210492 | Myxococcota bacterium | 2818507 | Bacteria | Bacteria | 55.1 | 5.66e-7 | NR | MEQ1505933.1 | 2818507 | g32198 | i0 | 44.2 | 0.957055214723926 | 52 | 29 | 95.7 | 0 | 162 | 7 | 623 | 674 | MEQ1505933.1 FAD-binding protein [Myxococcota bacterium] | diamond | 156 | 55.1 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcota bacterium | ||||||
| 30365043 | 30365043 | PRJNA613025_S_NODE_22632_length_202_cov_0.993464_g22478_i0 | PRJNA613025 | 22632 | 202 | 0.993464 | 2.00679728 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 48.9 | 1.44e-4 | NR | MCB9737160.1 | 2026735 | g22478 | i0 | 37.9 | 0.861386138613861 | 58 | 36 | 86.1 | 0 | 201 | 28 | 2 | 59 | MCB9737160.1 hypothetical protein [Deltaproteobacteria bacterium] | diamond | 174 | 48.9 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 31091361 | 31091361 | PRJNA613025_S_NODE_33935_length_161_cov_0.910714_g33781_i0 | PRJNA613025 | 33935 | 161 | 0.910714 | 1.46624954 | Polyangiaceae bacterium | 2268199 | Bacteria | Bacteria | 56.6 | 1.55e-7 | NR | MCL2779433.1 | 2268199 | g33781 | i0 | 58.1 | 0.801242236024845 | 43 | 18 | 80.1 | 0 | 10 | 138 | 340 | 382 | MCL2779433.1 hypothetical protein [Polyangiaceae bacterium] | diamond | 129 | 56.6 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangiaceae bacterium | ||||
| 31881837 | 31881837 | PRJNA613025_S_NODE_25737_length_185_cov_1.125000_g25583_i0 | PRJNA613025 | 25737 | 185 | 1.125 | 2.08125 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 80.5 | 8.31e-16 | NR | MSP61786.1 | 2026763 | g25583 | i0 | 63.9 | 0.989189189189189 | 61 | 22 | 98.9 | 0 | 185 | 3 | 42 | 102 | MSP61786.1 argininosuccinate lyase [Myxococcales bacterium] | diamond | 183 | 80.5 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;