RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA613025", tax_phylum = "Methanobacteriota" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 4 ✖

tax_phylum 1

  • Methanobacteriota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA613025 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10796010 10796010 PRJNA613025_S_NODE_22569_length_202_cov_1.339869_g22415_i0 PRJNA613025 22569 202 1.339869 2.70653538 Natrarchaeobaculum aegyptiacum 745377 Archaea Archaea 52.8 0.018   NTclustered gi|1196598842|gb|CP019893.1| 745377 g22415 i0 100 0.138613861386139 28 0 14 0 173 200 1526374 1526401 Natrarchaeobaculum aegyptiacum strain JW/NM-HA 15 chromosome, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natrarchaeobaculum Natrarchaeobaculum aegyptiacum
11352179 11352179 PRJNA613025_S_NODE_14209_length_292_cov_2.843621_g14055_i0 PRJNA613025 14209 292 2.843621 8.30337332 uncultured marine group II/III euryarchaeote AD1 1457711 Archaea Archaea 65.1 2.54e-11   NR AIE90946.1 1457711 g14055 i0 44.9 0.914383561643836 89 45 87.3 1 9 263 6 94 AIE90946.1 hypothetical protein [uncultured marine group II/III euryarchaeote AD1000_09_E08] diamond 267 65.1 1 Archaea   Methanobacteriati Methanobacteriota         uncultured marine group II/III euryarchaeote AD1000_09_E08
27933099 27933099 PRJNA613025_S_NODE_22485_length_203_cov_0.850649_g22331_i0 PRJNA613025 22485 203 0.850649 1.72681747 Halovivax cerinus 1487865 Archaea Archaea 42 0.04   NR WP_256532648.1 1487865 g22331 i0 40 0.738916256157635 50 27 73.9 1 34 183 33 79 WP_256532648.1 hypothetical protein [Halovivax cerinus] diamond 150 42 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Halovivax Halovivax cerinus
28090922 28090922 PRJNA613025_S_NODE_29545_length_169_cov_0.908333_g29391_i0 PRJNA613025 29545 169 0.908333 1.53508277 Halarchaeum sp. 2022601 Archaea Archaea 40.4 0.0289   NR MFB6077581.1 2022601 g29391 i0 46 0.887573964497041 50 23 88.8 2 155 6 40 85 MFB6077581.1 hypothetical protein [Halarchaeum sp.] diamond 150 40.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Halarchaeum Halarchaeum sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;