RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA613025" and tax_phylum = "Kitrinoviricota"

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tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA613025 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13346012 13346012 PRJNA613025_S_NODE_28671_length_172_cov_1.243902_g28517_i0 PRJNA613025 28671 172 1.243902 2.13951144 Ripothoz virus 3131336 Viruses Viruses 62.1 2.4e-5   NTclustered gi|2717322249|gb|PP173638.1| 3131336 g28517 i0 97.222 0.209302325581395 36 1 21 0 54 89 5236 5201 MAG: Ripothoz virus isolate MP3_k141_314104 genomic sequence blastn 36 62.1 1 Viruses   Orthornavirae Kitrinoviricota Magsaviricetes Nodamuvirales     Ripothoz virus
23544183 23544183 PRJNA613025_S_NODE_19959_length_220_cov_1.777778_g19805_i0 PRJNA613025 19959 220 1.777778 3.9111116 Ripothoz virus 3131336 Viruses Viruses 76.8 1.16e-9   NTclustered gi|2717322249|gb|PP173638.1| 3131336 g19805 i0 92.453 31.3 53 4 24 0 1 53 5384 5436 MAG: Ripothoz virus isolate MP3_k141_314104 genomic sequence blastn 6886 76.8 1 Viruses   Orthornavirae Kitrinoviricota Magsaviricetes Nodamuvirales     Ripothoz virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;