RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA613025" and tax_phylum = "Fornicata"

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tax_superkingdom 1

tax_phylum 1

  • Fornicata · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA613025 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31293954 31293954 PRJNA613025_S_NODE_10915_length_367_cov_1.254717_g10761_i0 PRJNA613025 10915 367 1.254717 4.60481139 Giardia 5740 Fornicata other_Eukaryota 44.7 0.0306   NR ESU41418.1 5741 g10761 i0 36.5 1.83923705722071 96 48 68.7 4 252 1 170 264 ESU41418.1 Variant-specific surface protein, partial [Giardia intestinalis] diamond 675 44.7 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis
31325604 31325604 PRJNA613025_S_NODE_33875_length_161_cov_0.910714_g33721_i0 PRJNA613025 33875 161 0.910714 1.46624954 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 57.4 4.76e-8   NR KAG9393630.1 201153 g33721 i0 58.8 1.93788819875776 51 21 95 0 4 156 63 113 KAG9393630.1 Ribosomal protein L7Ae/L8/Nhp2 family [Carpediemonas membranifera] diamond 312 57.8 0.993079584775087 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;