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contig_metadata

24 rows where bioproject = "PRJNA613025" and tax_phylum = "Discosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Discosea · 24 ✖

tax_clade 1

bioproject 1

  • PRJNA613025 · 24 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
591943 591943 PRJNA613025_S_NODE_29781_length_168_cov_1.285714_g29627_i0 PRJNA613025 29781 168 1.285714 2.15999952 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 161 2.25e-35   NTclustered gi|470420395|ref|XM_004337241.1| 1257118 g29627 i0 86.275 30.5 153 15 89 6 18 167 2227 2078 Acanthamoeba castellanii str. Neff eukaryotic translation elongation factor 2, putative (ACA1_220140), partial mRNA blastn 5124 161 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
3142595 3142595 PRJNA613025_S_NODE_21283_length_210_cov_1.807453_g21129_i0 PRJNA613025 21283 210 1.807453 3.7956513 Ripella platypodia 2047821 Discosea other_Eukaryota 353 4.51e-93   NTclustered gi|1269228378|gb|MF683503.1| 2047821 g21129 i0 97.143 100.952380952381 210 4 100 1 1 210 1533 1326 Ripella platypodia clone 26.10.41 18S ribosomal RNA gene, partial sequence blastn 21200 353 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella platypodia
3143092 3143092 PRJNA613025_S_NODE_9243_length_421_cov_2.768817_g9090_i0 PRJNA613025 9243 421 2.768817 11.65671957 Vannella sp. strain CH88/I 325078 Discosea other_Eukaryota 778 0   NTclustered gi|62865937|gb|AY929912.1| 325078 g9090 i0 100 81.458432304038 421 0 100 0 1 421 107 527 Vannella sp. strain CH88/I 18S small subunit ribosomal RNA gene, partial sequence blastn 34294 778 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. strain CH88/I
4419264 4419264 PRJNA613025_S_NODE_19804_length_221_cov_3.505814_g19650_i0 PRJNA613025 19804 221 3.505814 7.74784894 Stenamoeba amazonica 746910 Discosea other_Eukaryota 375 1.0199999999999998e-99   NTclustered gi|292399456|gb|GU810184.1| 746910 g19650 i0 97.706 15.0361990950226 218 5 99 0 1 218 737 954 Stenamoeba amazonica strain P119 small subunit ribosomal RNA gene, partial sequence blastn 3323 375 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Stenamoeba Stenamoeba amazonica
5695353 5695353 PRJNA613025_S_NODE_23165_length_198_cov_2.637584_g23011_i0 PRJNA613025 23165 198 2.637584 5.22241632 Stenamoeba amazonica 746910 Discosea other_Eukaryota 366 5.4e-97   NTclustered gi|292399456|gb|GU810184.1| 746910 g23011 i0 100 100.030303030303 198 0 100 0 1 198 1058 1255 Stenamoeba amazonica strain P119 small subunit ribosomal RNA gene, partial sequence blastn 19806 366 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Stenamoeba Stenamoeba amazonica
8244795 8244795 PRJNA613025_S_NODE_20747_length_214_cov_1.345455_g20593_i0 PRJNA613025 20747 214 1.345455 2.8792737 Cochliopodium larifeili 1017091 Discosea other_Eukaryota 309 1.01e-79   NTclustered gi|330902855|gb|JF298253.1| 1017091 g20593 i0 92.991 46.2803738317757 214 11 100 2 1 214 1728 1519 Cochliopodium larifeili clone 901 18S ribosomal RNA gene, partial sequence blastn 9904 309 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium larifeili
10796220 10796220 PRJNA613025_S_NODE_31309_length_165_cov_0.879310_g31155_i0 PRJNA613025 31309 165 0.87931 1.4508615 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 209 7.74e-50   NTclustered gi|470413687|ref|XM_004336557.1| 1257118 g31155 i0 89.634 95.9030303030303 164 17 99 0 2 165 742 905 Acanthamoeba castellanii str. Neff atpdependent rna helicase ddx6, putative (ACA1_271270), partial mRNA blastn 15824 209 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
13346335 13346335 PRJNA613025_S_NODE_9591_length_409_cov_1.611111_g9438_i0 PRJNA613025 9591 409 1.611111 6.58944399 Cochliopodium larifeili 1017091 Discosea other_Eukaryota 686 0   NTclustered gi|330902861|gb|JF298256.1| 1017091 g9438 i0 96.845 50 412 9 100 3 1 409 138 548 Cochliopodium larifeili clone 907 18S ribosomal RNA gene, partial sequence blastn 20450 686 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium larifeili
14620892 14620892 PRJNA613025_S_NODE_30512_length_166_cov_1.649573_g30358_i0 PRJNA613025 30512 166 1.649573 2.73829118 Vannella sp. GERB 1002216 Discosea other_Eukaryota 257 2.7400000000000003e-64   NTclustered gi|327391626|gb|HM363624.1| 1002216 g30358 i0 95.181 79.5602409638554 166 3 100 3 1 166 565 725 Vannella sp. GERB small subunit ribosomal RNA gene, partial sequence blastn 13207 257 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. GERB
14620909 14620909 PRJNA613025_S_NODE_31212_length_165_cov_1.293103_g31058_i0 PRJNA613025 31212 165 1.293103 2.13361995 Stenamoeba amazonica 746910 Discosea other_Eukaryota 294 2.08e-75   NTclustered gi|292399456|gb|GU810184.1| 746910 g31058 i0 98.788 47.7272727272727 165 2 100 0 1 165 1695 1859 Stenamoeba amazonica strain P119 small subunit ribosomal RNA gene, partial sequence blastn 7875 294 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Stenamoeba Stenamoeba amazonica
18443589 18443589 PRJNA613025_S_NODE_13335_length_309_cov_4.269231_g13181_i0 PRJNA613025 13335 309 4.2692310000000004 13.19192379 Stenamoeba amazonica 746910 Discosea other_Eukaryota 483 8.629999999999997e-132   NTclustered gi|292399456|gb|GU810184.1| 746910 g13181 i0 94.637 82.1844660194175 317 7 100 4 1 309 96 410 Stenamoeba amazonica strain P119 small subunit ribosomal RNA gene, partial sequence blastn 25395 483 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Stenamoeba Stenamoeba amazonica
20994160 20994160 PRJNA613025_S_NODE_28117_length_174_cov_1.816000_g27963_i0 PRJNA613025 28117 174 1.816 3.15984 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 107 6.03e-26   NR XP_004334335.1 1257118 g27963 i0 78.9 7.94827586206897 57 12 98.3 0 2 172 111 167 XP_004334335.1 actin related protein 2/3 complex, 41 kDa subunit [Acanthamoeba castellanii str. Neff] diamond 1383 107 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
22268800 22268800 PRJNA613025_S_NODE_17098_length_249_cov_2.040000_g16944_i0 PRJNA613025 17098 249 2.04 5.0796 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 122 3.49e-33   NR XP_004368153.1 1257118 g16944 i0 75 2.62650602409639 72 18 86.7 0 1 216 90 161 XP_004368153.1 ribosomal protein S17, putative [Acanthamoeba castellanii str. Neff] diamond 654 122 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
22268866 22268866 PRJNA613025_S_NODE_20178_length_218_cov_1.988166_g20024_i0 PRJNA613025 20178 218 1.988166 4.33420188 Paravannella minima 1443144 Discosea other_Eukaryota 135 1.86e-27   NTclustered gi|1583105587|ref|NC_040955.1| 1443144 g20024 i0 85.496 70.0871559633027 131 18 60 1 3 133 50025 49896 Paravannella minima mitochondrion, complete genome blastn 15279 135 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Paravannella Paravannella minima
23544422 23544422 PRJNA613025_S_NODE_31199_length_165_cov_1.318966_g31045_i0 PRJNA613025 31199 165 1.318966 2.1762939 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 89.8 1.05e-13   NTclustered gi|470515959|ref|XM_004352951.1| 1257118 g31045 i0 93.333 37.3393939393939 60 4 36 0 106 165 1107 1048 Acanthamoeba castellanii str. Neff calciumtranslocating P-type ATPase, PMCA-type, putative (ACA1_070960), partial mRNA blastn 6161 89.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
23544487 23544487 PRJNA613025_S_NODE_34779_length_151_cov_2.617647_g34625_i0 PRJNA613025 34779 151 2.617647 3.95264697 Cochliopodium larifeili 1017091 Discosea other_Eukaryota 224 2.4699999999999993e-54   NTclustered gi|330902855|gb|JF298253.1| 1017091 g34625 i0 93.421 27.2119205298013 152 8 99 2 1 150 1137 1288 Cochliopodium larifeili clone 901 18S ribosomal RNA gene, partial sequence blastn 4109 224 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium larifeili
24100560 24100560 PRJNA613025_S_NODE_14919_length_280_cov_2.575758_g14765_i0 PRJNA613025 14919 280 2.575758 7.2121224 Ripella 1217112 Discosea other_Eukaryota 470 6.01e-128   NTclustered gi|1269228349|gb|MF683474.1| 2047821 g14765 i0 97.473 98.8714285714286 277 3 98 4 6 280 700 974 Ripella platypodia clone 23.4.22 18S ribosomal RNA gene, partial sequence blastn 27684 472 0.995762711864407 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella platypodia
24817730 24817730 PRJNA613025_S_NODE_10340_length_383_cov_4.182635_g10187_i0 PRJNA613025 10340 383 4.182635 16.01949205 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 132 5.42e-37   NR 1PRQ_A 5755 g10187 i0 62.6 1.67624020887728 107 39 83.8 1 376 56 20 125 1PRQ_A Chain A, PROFILIN IA [Acanthamoeba castellanii] diamond 642 132 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
24817865 24817865 PRJNA613025_S_NODE_15600_length_270_cov_1.375566_g15446_i0 PRJNA613025 15600 270 1.375566 3.7140282 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 78.2 6.39e-16   NR XP_004338635.1 1257118 g15446 i0 58.9 3.01111111111111 73 29 81.1 1 264 46 82 153 XP_004338635.1 60S ribosomal protein L36, putative [Acanthamoeba castellanii str. Neff] diamond 813 78.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
24817888 24817888 PRJNA613025_S_NODE_16280_length_259_cov_2.766667_g16126_i0 PRJNA613025 16280 259 2.766667 7.16566753 Stenamoeba amazonica 746910 Discosea other_Eukaryota 464 2.5599999999999998e-126   NTclustered gi|292399456|gb|GU810184.1| 746910 g16126 i0 99.225 71.2625482625483 258 0 99 2 1 256 1848 2105 Stenamoeba amazonica strain P119 small subunit ribosomal RNA gene, partial sequence blastn 18457 464 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Stenamoeba Stenamoeba amazonica
27016941 27016941 PRJNA613025_S_NODE_10202_length_388_cov_2.407080_g10049_i0 PRJNA613025 10202 388 2.40708 9.3394704 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 164 2.69e-49   NR 7SOG_A 5755 g10049 i0 63.9 0.920103092783505 119 43 92 0 8 364 17 135 7SOG_A Chain A, Actophorin [Acanthamoeba castellanii] diamond 357 164 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27143100 27143100 PRJNA613025_S_NODE_26262_length_182_cov_1.533835_g26108_i0 PRJNA613025 26262 182 1.533835 2.7915797 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 84.3 4.55e-19   NR XP_004333102.1 1257118 g26108 i0 80.8 1.71428571428571 52 10 85.7 0 178 23 81 132 XP_004333102.1 ribosomal protein L32, putative [Acanthamoeba castellanii str. Neff] diamond 312 84.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27649045 27649045 PRJNA613025_S_NODE_24884_length_189_cov_1.092857_g24730_i0 PRJNA613025 24884 189 1.092857 2.06549973 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 87.4 1.54e-19   NR XP_004356664.1 1257118 g24730 i0 72.9 1.52380952380952 48 13 76.2 0 1 144 151 198 XP_004356664.1 rho guanine dissociation factor isoform 2, putative [Acanthamoeba castellanii str. Neff] diamond 288 87.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31976823 31976823 PRJNA613025_S_NODE_20078_length_219_cov_1.647059_g19924_i0 PRJNA613025 20078 219 1.647059 3.60705921 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 111 6.270000000000001e-27   NR XP_004333651.1 1257118 g19924 i0 64.4 1 73 26 100 0 219 1 50 122 XP_004333651.1 coronin3, putative [Acanthamoeba castellanii str. Neff] diamond 219 111 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;