RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA613025" and tax_phylum = "Candidatus Latescibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Latescibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA613025 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
591665 591665 PRJNA613025_S_NODE_17241_length_247_cov_2.550505_g17087_i0 PRJNA613025 17241 247 2.550505 6.29974735 uncultured Latescibacterota bacterium 199737 Bacteria Bacteria 132 2.79e-26   NTclustered gi|82523633|emb|AJ937675.1| 199737 g17087 i0 77.966 50.3238866396761 236 34 90 12 1 223 2018 2248 Uncultured candidate division WS3 bacterium 16S rRNA gene (partial), ITS1, tRNA-Ile gene, tRNA-Ala gene and 23S rRNA gene (partial), clone b1bcf1.1.f04.rrna.clone7 blastn 12430 132 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         uncultured Latescibacterota bacterium
15177165 15177165 PRJNA613025_S_NODE_28272_length_174_cov_1.112000_g28118_i0 PRJNA613025 28272 174 1.112 1.93488 Bacteria 2 Bacteria Bacteria 65.8 1.88e-6   NTclustered gi|2518556444|emb|OX638377.1| 199737 g28118 i0 95.122 12.7988505747126 41 2 26 0 90 130 1038119 1038159 MAG: uncultured Latescibacteria bacterium isolate 96736c8f-e424-4c7a-a7cc-5c0d8e7e2df7 genome assembly, chromosome: 1 blastn 2227 65.8 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         uncultured Latescibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;