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contig_metadata

16 rows where bioproject = "PRJNA613025", tax_phylum = "Apicomplexa" and tax_superkingdom = "Eukaryota"

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analysis 2

tax_superkingdom 1

  • Eukaryota · 16 ✖

tax_phylum 1

  • Apicomplexa · 16 ✖

tax_clade 1

bioproject 1

  • PRJNA613025 · 16 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3142324 3142324 PRJNA613025_S_NODE_1023_length_2235_cov_3.654620_g990_i0 PRJNA613025 1023 2235 3.65462 81.680757 Cryptosporidium muris 5808 SAR_Eukaryotes SAR_Eukaryotes 1434 0   NTclustered gi|209883069|ref|XM_002142927.1| 441375 g990 i0 98.522 0.36331096196868 812 12 36 0 216 1027 812 1 Cryptosporidium muris RN66 uncharacterized protein (CMU_004310), partial mRNA blastn 812 1434 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium muris
5695054 5695054 PRJNA613025_S_NODE_10705_length_373_cov_1.151235_g10552_i0 PRJNA613025 10705 373 1.151235 4.29410655 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 501 2.93e-137   NTclustered gi|820695469|tpe|LN714488.1| 572307 g10552 i0 94.207 58.970509383378 328 19 100 0 5 332 298909 299236 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 21996 501 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
6252433 6252433 PRJNA613025_S_NODE_14405_length_289_cov_1.675000_g14251_i0 PRJNA613025 14405 289 1.675 4.84075 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 529 1.01e-145   NTclustered gi|166084454|gb|EF024977.1| 404735 g14251 i0 99.654 101.429065743945 289 1 100 0 1 289 1013 725 Eimeriidae environmental sample clone Elev_18S_1525 18S ribosomal RNA gene, partial sequence blastn 29313 529 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae   uncultured Eimeriidae
9520486 9520486 PRJNA613025_S_NODE_7568_length_496_cov_3.539150_g7416_i0 PRJNA613025 7568 496 3.53915 17.554184 Cryptosporidium muris 5808 SAR_Eukaryotes SAR_Eukaryotes 773 0   NTclustered gi|209883090|ref|XM_002142934.1| 441375 g7416 i0 94.758 1.85887096774194 496 26 100 0 1 496 831 336 Cryptosporidium muris RN66 uncharacterized protein (CMU_002460), partial mRNA blastn 922 773 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium muris
10077294 10077294 PRJNA613025_S_NODE_25648_length_185_cov_1.794118_g25494_i0 PRJNA613025 25648 185 1.794118 3.3191183 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 278 2.39e-70   NTclustered gi|166084454|gb|EF024977.1| 404735 g25494 i0 94.022 59.5297297297297 184 10 99 1 2 184 1499 1316 Eimeriidae environmental sample clone Elev_18S_1525 18S ribosomal RNA gene, partial sequence blastn 11013 278 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae   uncultured Eimeriidae
13345618 13345618 PRJNA613025_S_NODE_12991_length_316_cov_4.322097_g12837_i0 PRJNA613025 12991 316 4.322097 13.65782652 uncultured Gregarina 2480866 SAR_Eukaryotes SAR_Eukaryotes 189 2.16e-43   NTclustered gi|1496531432|gb|MG766260.1| 2480866 g12837 i0 91.367 42.4050632911392 139 11 44 1 2 140 1126 1263 Uncultured Gregarina small subunit ribosomal RNA gene, partial sequence blastn 13400 189 1 Eukaryota Sar   Apicomplexa Conoidasida Eugregarinorida     uncultured Gregarina
14620575 14620575 PRJNA613025_S_NODE_15532_length_271_cov_1.337838_g15378_i0 PRJNA613025 15532 271 1.337838 3.62554098 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 95.3 4.07e-15   NTclustered gi|820693004|tpe|LN714485.1| 572307 g15378 i0 86.364 0.933579335793358 88 10 32 2 45 131 854667 854581 TPA_asm: Neospora caninum Liverpool, chromosome chrX, complete genome blastn 253 95.3 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
14621043 14621043 PRJNA613025_S_NODE_5072_length_677_cov_3.890127_g4931_i0 PRJNA613025 5072 677 3.890127 26.33615979 Cryptosporidium muris 5808 SAR_Eukaryotes SAR_Eukaryotes 588 4.1599999999999997e-163   NTclustered gi|209883090|ref|XM_002142934.1| 441375 g4931 i0 97.935 2.82422451994092 339 7 50 0 339 677 1 339 Cryptosporidium muris RN66 uncharacterized protein (CMU_002460), partial mRNA blastn 1912 588 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium muris
14621091 14621091 PRJNA613025_S_NODE_6592_length_555_cov_3.928854_g6442_i0 PRJNA613025 6592 555 3.928854 21.8051397 Cryptosporidium muris 5808 SAR_Eukaryotes SAR_Eukaryotes 453 1.2800000000000002e-122   NTclustered gi|209883067|ref|XM_002142926.1| 441375 g6442 i0 98.819 0.457657657657658 254 3 46 0 115 368 1 254 Cryptosporidium muris RN66 uncharacterized protein (CMU_004300), partial mRNA blastn 254 453 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium muris
17169491 17169491 PRJNA613025_S_NODE_1614_length_1619_cov_4.542675_g1563_i0 PRJNA613025 1614 1619 4.542675 73.54590825 Cryptosporidium muris 5808 SAR_Eukaryotes SAR_Eukaryotes 1969 0   NTclustered gi|209883104|ref|XM_002142938.1| 441375 g1563 i0 98.057 1.65719579987647 1132 22 70 0 1 1132 1132 1 Cryptosporidium muris RN66 uncharacterized protein (CMU_004200), partial mRNA blastn 2683 1969 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium muris
19718215 19718215 PRJNA613025_S_NODE_18896_length_230_cov_1.403315_g18742_i0 PRJNA613025 18896 230 1.403315 3.2276245 Plasmodium vinckei 5860 SAR_Eukaryotes SAR_Eukaryotes 80.5 9.42e-11   NTclustered gi|1931714359|ref|XR_552297.2| 54757 g18742 i0 87.324 15.4565217391304 71 8 30 1 103 172 4032 4102 Plasmodium vinckei vinckei ribosomal RNA (PVVCY_0502190), rRNA blastn 3555 80.5 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium vinckei
20994173 20994173 PRJNA613025_S_NODE_28757_length_172_cov_0.943089_g28603_i0 PRJNA613025 28757 172 0.943089 1.62211308 Theileria sp. CAAS-2005 346098 SAR_Eukaryotes SAR_Eukaryotes 63.9 6.66e-6   NTclustered gi|75875723|gb|DQ187375.1| 346098 g28603 i0 93.023 0.25 43 3 25 0 109 151 470 428 Theileria sp. CAAS-2005 clone 23 unknown protein mRNA, partial cds blastn 43 63.9 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria sp. CAAS-2005
24817919 24817919 PRJNA613025_S_NODE_17280_length_247_cov_1.545455_g17126_i0 PRJNA613025 17280 247 1.545455 3.81727385 Theileria orientalis 68886 SAR_Eukaryotes SAR_Eukaryotes 165 2.75e-36   NTclustered gi|697890192|ref|XM_009692043.1| 869250 g17126 i0 80.275 0.882591093117409 218 43 88 0 12 229 169 386 Theileria orientalis strain Shintoku ribosomal protein L23 partial mRNA blastn 218 165 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria orientalis
30851556 30851556 PRJNA613025_S_NODE_19774_length_222_cov_1.173410_g19620_i0 PRJNA613025 19774 222 1.17341 2.6049702 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 60.8 1.14e-8   NR TRY50678.1 756076 g19620 i0 40.8 2.71621621621622 76 43 100 1 1 222 305 380 TRY50678.1 Elongation factor EF1-gamma (Glutathione S-transferase family) [Cryptosporidium tyzzeri] diamond 603 60.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium tyzzeri
31597527 31597527 PRJNA613025_S_NODE_29216_length_170_cov_1.256198_g29062_i0 PRJNA613025 29216 170 1.256198 2.1355366 Cyclospora cayetanensis 88456 SAR_Eukaryotes SAR_Eukaryotes 69.7 4.26e-12   NR OEH79924.1 88456 g29062 i0 86.1 3.24705882352941 36 5 63.5 0 63 170 188 223 OEH79924.1 glycyl-tRNA synthetase [Cyclospora cayetanensis] diamond 552 69.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis
31692152 31692152 PRJNA613025_S_NODE_32677_length_163_cov_0.894737_g32523_i0 PRJNA613025 32677 163 0.894737 1.45842131 Neospora caninum Liverpool 572307 SAR_Eukaryotes SAR_Eukaryotes 77 1.92e-16   NR XP_003884403.1 572307 g32523 i0 71.2 1.91411042944785 52 15 95.7 0 156 1 45 96 XP_003884403.1 hypothetical protein NCLIV_048030 [Neospora caninum Liverpool] diamond 312 77 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;