contig_metadata
5 rows where bioproject = "PRJNA613025", tax_kingdom = "Pseudomonadati" and tax_phylum = "Campylobacterota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 13902779 | 13902779 | PRJNA613025_S_NODE_29371_length_169_cov_1.700000_g29217_i0 | PRJNA613025 | 29371 | 169 | 1.7 | 2.873 | Campylobacterales | 213849 | Bacteria | Bacteria | 100 | 4.97e-17 | NTclustered | gi|34483186|emb|BX571660.1| | 844 | g29217 | i0 | 88.889 | 41.508875739645 | 81 | 9 | 48 | 0 | 68 | 148 | 335613 | 335533 | Wolinella succinogenes, complete genome; segment 4/7 | blastn | 7015 | 100 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Wolinella | Wolinella succinogenes | ||
| 18443622 | 18443622 | PRJNA613025_S_NODE_14455_length_288_cov_1.828452_g14301_i0 | PRJNA613025 | 14455 | 288 | 1.828452 | 5.26594176 | Campylobacter sp. 19-13652 | 2840180 | Bacteria | Bacteria | 65.8 | 3.42e-6 | NTclustered | gi|2052158881|dbj|AP024713.1| | 2840180 | g14301 | i0 | 82.667 | 0.78125 | 75 | 11 | 25 | 2 | 71 | 143 | 1151782 | 1151708 | Campylobacter sp. 19-13652 DNA, complete genome | blastn | 225 | 65.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter sp. 19-13652 | ||
| 27851271 | 27851271 | PRJNA613025_S_NODE_16164_length_261_cov_1.655660_g16010_i0 | PRJNA613025 | 16164 | 261 | 1.65566 | 4.3212726 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 87.8 | 6.02e-18 | NR | NPA10987.1 | 2026809 | g16010 | i0 | 63.5 | 3.36781609195402 | 63 | 23 | 72.4 | 0 | 2 | 190 | 446 | 508 | NPA10987.1 phosphoenolpyruvate carboxykinase (ATP) [Campylobacterota bacterium] | diamond | 879 | 88.6 | 0.99097065462754 | Bacteria | Pseudomonadati | Campylobacterota | Campylobacterota bacterium | ||||||
| 29764200 | 29764200 | PRJNA613025_S_NODE_27311_length_178_cov_0.914729_g27157_i0 | PRJNA613025 | 27311 | 178 | 0.914729 | 1.62821762 | Helicobacter pylori | 210 | Bacteria | Bacteria | 56.2 | 5.74e-9 | NR | GAA9221949.1 | 210 | g27157 | i0 | 70 | 1.31460674157303 | 40 | 10 | 64 | 1 | 177 | 64 | 3 | 42 | GAA9221949.1 hypothetical protein Kyoto198A_3800 [Helicobacter pylori] | diamond | 234 | 56.2 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 30788407 | 30788407 | PRJNA613025_S_NODE_24254_length_192_cov_2.132867_g24100_i0 | PRJNA613025 | 24254 | 192 | 2.132867 | 4.09510464 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 64.3 | 2.38e-11 | NR | AOO65847.1 | 1193502 | g24100 | i0 | 59.6 | 1.78125 | 57 | 23 | 89.1 | 0 | 5 | 175 | 49 | 105 | AOO65847.1 putative lipoprotein [Sulfurospirillum halorespirans DSM 13726] | diamond | 342 | 64.3 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurospirillaceae | Sulfurospirillum | Sulfurospirillum halorespirans |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;