contig_metadata
10 rows where bioproject = "PRJNA613025", tax_kingdom = "Pseudomonadati" and tax_phylum = "Bdellovibrionota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 591931 | 591931 | PRJNA613025_S_NODE_29061_length_170_cov_2.322314_g28907_i0 | PRJNA613025 | 29061 | 170 | 2.322314 | 3.9479338 | Bdellovibrio bacteriovorus | 959 | Bacteria | Bacteria | 111 | 2.31e-20 | NTclustered | gi|578016248|gb|CP002190.1| | 765869 | g28907 | i0 | 79.394 | 5.45882352941176 | 165 | 29 | 95 | 5 | 1 | 162 | 609798 | 609636 | Bdellovibrio bacteriovorus W, complete genome | blastn | 928 | 111 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 6970073 | 6970073 | PRJNA613025_S_NODE_19086_length_228_cov_1.642458_g18932_i0 | PRJNA613025 | 19086 | 228 | 1.642458 | 3.74480424 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 136 | 2.42e-37 | NR | MCB0369725.1 | 2053517 | g18932 | i0 | 89.3 | 1.97368421052632 | 75 | 8 | 98.7 | 0 | 3 | 227 | 22 | 96 | MCB0369725.1 hypothetical protein [Bdellovibrionales bacterium] | diamond | 450 | 136 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 6970244 | 6970244 | PRJNA613025_S_NODE_26306_length_182_cov_1.150376_g26152_i0 | PRJNA613025 | 26306 | 182 | 1.150376 | 2.09368432 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 224 | 3.1e-54 | NTclustered | gi|2621706492|emb|OY764265.1| | 3034175 | g26152 | i0 | 88.95 | 169.203296703297 | 181 | 20 | 99 | 0 | 1 | 181 | 1697596 | 1697416 | MAG: Bdellovibrionota bacterium isolate efddfb02-ff0c-4ac5-ae96-c61d995422a3 genome assembly, chromosome: 1 | blastn | 30795 | 224 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 17169349 | 17169349 | PRJNA613025_S_NODE_11354_length_354_cov_2.954098_g11200_i0 | PRJNA613025 | 11354 | 354 | 2.954098 | 10.45750692 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 195 | 3.58e-58 | NR | MCB0368368.1 | 2053517 | g11200 | i0 | 81.9 | 0.983050847457627 | 116 | 21 | 98.3 | 0 | 354 | 7 | 117 | 232 | MCB0368368.1 hypothetical protein [Bdellovibrionales bacterium] | diamond | 348 | 195 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 17726672 | 17726672 | PRJNA613025_S_NODE_22714_length_201_cov_1.342105_g22560_i0 | PRJNA613025 | 22714 | 201 | 1.342105 | 2.69763105 | Pseudobdellovibrionaceae | 213483 | Bacteria | Bacteria | 363 | 7.109999999999999e-96 | NTclustered | gi|507148233|ref|NR_103040.1| | 453816 | g22560 | i0 | 99.497 | 169.388059701493 | 199 | 1 | 99 | 0 | 3 | 201 | 752 | 950 | Bdellovibrio exovorus strain JSS 23S ribosomal RNA gene, complete sequence | blastn | 34047 | 363 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio exovorus | ||
| 19718279 | 19718279 | PRJNA613025_S_NODE_21216_length_211_cov_0.938272_g21062_i0 | PRJNA613025 | 21216 | 211 | 0.938272 | 1.97975392 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 107 | 2.06e-25 | NR | MCB0370360.1 | 2053517 | g21062 | i0 | 78.6 | 0.995260663507109 | 70 | 15 | 99.5 | 0 | 210 | 1 | 424 | 493 | MCB0370360.1 HAD-IC family P-type ATPase [Bdellovibrionales bacterium] | diamond | 210 | 107 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 20275200 | 20275200 | PRJNA613025_S_NODE_17476_length_244_cov_5.323077_g17322_i0 | PRJNA613025 | 17476 | 244 | 5.323077 | 12.98830788 | Micavibrio | 213485 | Bacteria | Bacteria | 291 | 4.28e-74 | NTclustered | gi|470487404|ref|NR_076816.1| | 349221 | g17322 | i0 | 88.211 | 197.217213114754 | 246 | 26 | 100 | 2 | 1 | 244 | 2733 | 2489 | Micavibrio aeruginosavorus strain ARL-13 23S ribosomal RNA gene, complete sequence | blastn | 48121 | 291 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Micavibrio | Micavibrio aeruginosavorus | ||
| 28388097 | 28388097 | PRJNA613025_S_NODE_18026_length_238_cov_4.037037_g17872_i0 | PRJNA613025 | 18026 | 238 | 4.037037 | 9.60814806 | Bacteria | 2 | Bacteria | Bacteria | 108 | 2.95e-29 | NR | MCB0370183.1 | 2053517 | g17872 | i0 | 89.1 | 2.36974789915966 | 55 | 6 | 69.3 | 0 | 54 | 218 | 1 | 55 | MCB0370183.1 hypothetical protein [Bdellovibrionales bacterium] | diamond | 564 | 108 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 30238253 | 30238253 | PRJNA613025_S_NODE_15872_length_266_cov_0.935484_g15718_i0 | PRJNA613025 | 15872 | 266 | 0.935484 | 2.48838744 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 163 | 3.19e-49 | NR | MCB0369646.1 | 2053517 | g15718 | i0 | 90.9 | 0.992481203007519 | 88 | 8 | 99.2 | 0 | 1 | 264 | 47 | 134 | MCB0369646.1 50S ribosomal protein L22 [Bdellovibrionales bacterium] | diamond | 264 | 163 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 32861353 | 32861353 | PRJNA613025_S_NODE_15400_length_273_cov_1.089286_g15246_i0 | PRJNA613025 | 15400 | 273 | 1.089286 | 2.97375078 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 88.6 | 6.69e-20 | NR | MCB0371231.1 | 2053517 | g15246 | i0 | 67.3 | 0.604395604395604 | 55 | 18 | 60.4 | 0 | 108 | 272 | 1 | 55 | MCB0371231.1 hypothetical protein [Bdellovibrionales bacterium] | diamond | 165 | 88.6 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;