RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA613025", tax_kingdom = "Bacillati" and tax_phylum = "Cyanobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cyanobacteriota · 3 ✖

tax_kingdom 1

  • Bacillati · 3 ✖

bioproject 1

  • PRJNA613025 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20275227 20275227 PRJNA613025_S_NODE_20436_length_216_cov_2.377246_g20282_i0 PRJNA613025 20436 216 2.377246 5.13485136 Chroococcidiopsis 54298 Bacteria Bacteria 204 4.9699999999999994e-48   NTclustered gi|146740648|emb|AM709635.1| 171389 g20282 i0 83.945 446.74537037037 218 29 100 6 1 216 3133 2920 Chroococcidiopsis sp. SAG 2025 partial ribosomal RNA operon, strain SAG 2025 blastn 96497 204 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcidiopsidales Chroococcidiopsidaceae Chroococcidiopsis Chroococcidiopsis sp. SAG 2025
22269022 22269022 PRJNA613025_S_NODE_26838_length_179_cov_9.723077_g26684_i0 PRJNA613025 26838 179 9.723077 17.40430783 Dolichospermum macrosporum 135103 Bacteria Bacteria 309 8.15e-80   NTclustered gi|13516977|dbj|AB047103.1| 135103 g26684 i0 97.765 101.027932960894 179 4 100 0 1 179 839 661 Anabaena macrospora gene for 16S rRNA, partial sequence blastn 18084 309 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Nostocales Aphanizomenonaceae Dolichospermum Dolichospermum macrosporum
31262404 31262404 PRJNA613025_S_NODE_18015_length_238_cov_63.084656_g17861_i0 PRJNA613025 18015 238 63.084656 150.14148128 Oscillatoriales 1150 Bacteria Bacteria 44.7 0.00721   NR WP_224413378.1 331517 g17861 i0 51.3 1.53781512605042 39 19 49.2 0 24 140 33 71 WP_224413378.1 chloride channel protein [Oscillatoria salina] diamond 366 44.7 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Oscillatoriales Oscillatoriaceae Oscillatoria Oscillatoria salina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;