RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA613025", tax_clade = "Opisthokonta" and tax_phylum = "Xenacoelomorpha"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Xenacoelomorpha · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJNA613025 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4419214 4419214 PRJNA613025_S_NODE_17364_length_246_cov_1.507614_g17210_i0 PRJNA613025 17364 246 1.507614 3.70873044 Haploposthia rubropunctata 2183133 Xenacoelomorpha other_Eukaryota 97.1 1.01e-15   NTclustered gi|2065292245|gb|MZ520447.1| 2183133 g17210 i0 82.883 25.0040650406504 111 15 44 4 60 168 1600 1492 Haploposthia rubropunctata isolate UJ13-503 large subunit ribosomal RNA gene, partial sequence blastn 6151 97.1 1 Eukaryota Opisthokonta Metazoa Xenacoelomorpha   Acoela Haploposthiidae Haploposthia Haploposthia rubropunctata
20993949 20993949 PRJNA613025_S_NODE_18417_length_234_cov_3.054054_g18263_i0 PRJNA613025 18417 234 3.054054 7.14648636 Diopisthoporus sp. UJ-2011-nsp 996757 Xenacoelomorpha other_Eukaryota 119 2.04e-22   NTclustered gi|378781022|emb|FR837776.1| 996757 g18263 i0 80.745 18.0897435897436 161 23 68 7 75 233 1032 1186 Diopisthoporus sp. UJ-2011-nsp partial 28S rRNA gene, specimen voucher AWSp-16 blastn 4233 119 1 Eukaryota Opisthokonta Metazoa Xenacoelomorpha   Acoela Diopisthoporidae Diopisthoporus Diopisthoporus sp. UJ-2011-nsp
31976829 31976829 PRJNA613025_S_NODE_28118_length_174_cov_1.800000_g27964_i0 PRJNA613025 28118 174 1.8 3.132 Symsagittifera roscoffensis 84072 Xenacoelomorpha other_Eukaryota 67.8 3.89e-12   NR XP_063720098.1 84072 g27964 i0 71.1 0.655172413793103 38 11 65.5 0 3 116 152 189 XP_063720098.1 large ribosomal subunit protein eL42-like [Symsagittifera roscoffensis] diamond 114 67.8 1 Eukaryota Opisthokonta Metazoa Xenacoelomorpha   Acoela Sagittiferidae Symsagittifera Symsagittifera roscoffensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;