RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA611476", tax_phylum = "Thermoproteota" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Thermoproteota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA611476 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10794374 10794374 PRJNA611476_P_NODE_90749_length_248_cov_0.880000_g89958_i0 PRJNA611476 90749 248 0.88 2.1824 Vulcanisaeta souniana 164452 Archaea Archaea 58.4 4.82e-4   NTclustered gi|2314964910|dbj|AP026830.1| 1293586 g89958 i0 97.059 0.282258064516129 34 1 14 0 118 151 1565066 1565033 Vulcanisaeta souniana JCM 11219 DNA, complete genome blastn 70 58.4 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Vulcanisaeta Vulcanisaeta souniana
27048698 27048698 PRJNA611476_P_NODE_98762_length_246_cov_0.890173_g97971_i0 PRJNA611476 98762 246 0.890173 2.18982558 Thermoprotei archaeon 2250277 Archaea Archaea 69.3 1.73e-11   NR MCD6508967.1 2250277 g97971 i0 40.8 1.75609756097561 71 41 86.6 1 4 216 248 317 MCD6508967.1 carbohydrate binding domain-containing protein [Thermoprotei archaeon] diamond 432 69.3 1 Archaea   Thermoproteati Thermoproteota Thermoprotei       Thermoprotei archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;