RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA611476" and tax_phylum = "Preplasmiviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Preplasmiviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA611476 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19716592 19716592 PRJNA611476_P_NODE_84976_length_250_cov_0.870056_g84185_i0 PRJNA611476 84976 250 0.870056 2.17514 Aviadenovirus columbidae 3426523 Viruses Viruses 52.8 0.023   NTclustered gi|1088472350|ref|NC_031503.1| 1907767 g84185 i0 85.714 0.196 49 7 20 0 29 77 34046 33998 Pigeon adenovirus 2 isolate YPDS-Y-V1.A19.11-2013, complete genome blastn 49 52.8 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Aviadenovirus Aviadenovirus columbidae
29700835 29700835 PRJNA611476_P_NODE_87790_length_249_cov_0.875000_g86999_i0 PRJNA611476 87790 249 0.875 2.17875 Adintovirus sarcophilus4121 3115944 Viruses Viruses 58.5 3.08e-8   NR DBA51035.1 3115944 g86999 i0 41.1 0.674698795180723 56 33 67.5 0 168 1 68 123 DBA51035.1 MAG TPA_asm: Adintoc2 [Adintovirus sarcophilus4121] diamond 168 58.5 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Adintovirus sarcophilus4121

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;