RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA611476", tax_phylum = "Nitrososphaerota" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 3 ✖

tax_phylum 1

  • Nitrososphaerota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA611476 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13344204 13344204 PRJNA611476_P_NODE_88051_length_249_cov_0.875000_g87260_i0 PRJNA611476 88051 249 0.875 2.17875 uncultured marine thaumarchaeote AD1000_100_C06 1455887 Archaea Archaea 455 1.47e-123   NTclustered gi|663500052|gb|KF900324.1| 1455887 g87260 i0 99.598 1 249 1 100 0 1 249 29942 29694 Uncultured marine thaumarchaeote AD1000_100_C06 genomic sequence blastn 249 455 1 Archaea   Thermoproteati Nitrososphaerota         uncultured marine thaumarchaeote AD1000_100_C06
29101342 29101342 PRJNA611476_P_NODE_38468_length_342_cov_1.144981_g37677_i0 PRJNA611476 38468 342 1.144981 3.91583502 Nitrososphaerota archaeon 2026795 Archaea Archaea 49.7 1.71e-4   NR NMJ87805.1 2026795 g37677 i0 51.4 0.324561403508772 37 18 32.5 0 230 340 16 52 NMJ87805.1 hypothetical protein [Nitrososphaerota archaeon] diamond 111 49.7 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
32672285 32672285 PRJNA611476_P_NODE_62820_length_280_cov_1.164251_g62029_i0 PRJNA611476 62820 280 1.164251 3.2599028 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 182 3.19e-56   NR HXV88298.1 2169593 g62029 i0 89.2 0.996428571428571 93 10 99.6 0 279 1 117 209 HXV88298.1 MEDS domain-containing protein [Nitrososphaeraceae archaeon] diamond 279 182 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;