RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA611476" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA611476 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27428023 27428023 PRJNA611476_P_NODE_100743_length_245_cov_0.895349_g99952_i0 PRJNA611476 100743 245 0.895349 2.19360505 Enterocytozoon hepatopenaei 646526 Fungi Fungi 117 3.1299999999999997e-30   NR OQS54224.1 646526 g99952 i0 71.6 0.991836734693878 81 23 99.2 0 3 245 109 189 OQS54224.1 rpl5a [Enterocytozoon hepatopenaei] diamond 243 117 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei
29258927 29258927 PRJNA611476_P_NODE_77209_length_252_cov_1.938547_g76418_i0 PRJNA611476 77209 252 1.938547 4.88513844 Pseudoloma neurophilia 146866 Fungi Fungi 47.4 7.27e-4   NR KRH92337.1 146866 g76418 i0 33.3 0.964285714285714 81 48 91.7 3 232 2 5 83 KRH92337.1 GTP-binding protein [Pseudoloma neurophilia] diamond 243 47.4 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
31154118 31154118 PRJNA611476_P_NODE_90875_length_248_cov_0.880000_g90084_i0 PRJNA611476 90875 248 0.88 2.1824 Pancytospora epiphaga 1938578 Fungi Fungi 61.6 6.2e-10   NR KAI5173455.1 1938578 g90084 i0 65 0.967741935483871 40 14 48.4 0 127 246 1 40 KAI5173455.1 transcription elongation factor SPT4 [Pancytospora epiphaga] diamond 240 61.6 1 Eukaryota Opisthokonta Fungi Microsporidia       Pancytospora Pancytospora epiphaga
32578016 32578016 PRJNA611476_P_NODE_104699_length_244_cov_0.900585_g103908_i0 PRJNA611476 104699 244 0.900585 2.1974274 Enterocytozoon hepatopenaei 646526 Fungi Fungi 128 7.19e-36   NR OQS54421.1 646526 g103908 i0 64.1 0.959016393442623 78 28 95.9 0 242 9 32 109 OQS54421.1 hypothetical protein EHP00_1915 [Enterocytozoon hepatopenaei] diamond 234 128 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;