RNAquarium Metadata Server
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contig_metadata

14 rows where bioproject = "PRJNA611476", tax_phylum = "Kitrinoviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 14 ✖

tax_phylum 1

  • Kitrinoviricota · 14 ✖

tax_kingdom 1

bioproject 1

  • PRJNA611476 · 14 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9517717 9517717 PRJNA611476_P_NODE_35328_length_353_cov_1.139286_g34537_i0 PRJNA611476 35328 353 1.139286 4.02167958 Potexvirus ecspotati 3433837 Viruses Viruses 608 1.579999999999999e-169   NTclustered gi|2025365924|gb|MT752833.1| 12183 g34537 i0 97.734 99.957507082153 353 8 100 0 1 353 581 933 Potato virus X isolate Jin118-2, complete genome blastn 35285 608 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus ecspotati
10793427 10793427 PRJNA611476_P_NODE_23109_length_418_cov_1.281159_g22318_i0 PRJNA611476 23109 418 1.281159 5.35524462 Daiswa trichovirus 1 2794435 Viruses Viruses 407 7.45e-109   NTclustered gi|1950492700|gb|MW328734.1| 2794435 g22318 i0 84.211 1 418 66 100 0 1 418 6358 5941 Daiswa trichovirus 1 RdRp, MP, and CP genes, complete cds blastn 418 407 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Trichovirus Daiswa trichovirus 1
10793739 10793739 PRJNA611476_P_NODE_45669_length_320_cov_0.935223_g44878_i0 PRJNA611476 45669 320 0.935223 2.9927136 Daiswa trichovirus 1 2794435 Viruses Viruses 331 3.44e-86   NTclustered gi|1950492700|gb|MW328734.1| 2794435 g44878 i0 85.312 1 320 47 100 0 1 320 5191 5510 Daiswa trichovirus 1 RdRp, MP, and CP genes, complete cds blastn 320 331 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Trichovirus Daiswa trichovirus 1
10794353 10794353 PRJNA611476_P_NODE_89409_length_248_cov_1.320000_g88618_i0 PRJNA611476 89409 248 1.32 3.2736 Potexvirus ecspotati 3433837 Viruses Viruses 453 5.2600000000000005e-123   NTclustered gi|2025365630|gb|MT752784.1| 12183 g88618 i0 99.597 99.9798387096774 248 1 100 0 1 248 3099 3346 Potato virus X isolate Ica098-2, complete genome blastn 24795 453 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus ecspotati
17167734 17167734 PRJNA611476_P_NODE_71614_length_263_cov_1.621053_g70823_i0 PRJNA611476 71614 263 1.621053 4.26336939 Potexvirus ecspotati 3433837 Viruses Viruses 475 1.2e-129   NTclustered gi|2025365426|gb|MT752750.1| 12183 g70823 i0 99.24 101.011406844106 263 2 100 0 1 263 6380 6118 Potato virus X isolate Hco062, complete genome blastn 26566 475 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus ecspotati
20991889 20991889 PRJNA611476_P_NODE_46097_length_318_cov_1.893878_g45306_i0 PRJNA611476 46097 318 1.893878 6.02253204 Daiswa trichovirus 1 2794435 Viruses Viruses 331 3.4200000000000004e-86   NTclustered gi|1950492700|gb|MW328734.1| 2794435 g45306 i0 85.852 0.977987421383648 311 44 98 0 8 318 5529 5219 Daiswa trichovirus 1 RdRp, MP, and CP genes, complete cds blastn 311 331 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Trichovirus Daiswa trichovirus 1
22266405 22266405 PRJNA611476_P_NODE_26458_length_395_cov_1.369565_g25667_i0 PRJNA611476 26458 395 1.369565 5.40978175 Tobamovirus tabaci 3432891 Viruses Viruses 719 0   NTclustered gi|348605458|gb|JF920727.1| 12242 g25667 i0 99.494 98.7443037974683 395 2 100 0 1 395 6201 5807 Tobacco mosaic virus isolate Shanxi, complete genome blastn 39004 719 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci
28753892 28753892 PRJNA611476_P_NODE_112687_length_242_cov_0.911243_g111896_i0 PRJNA611476 112687 242 0.911243 2.20520806 Glyptostrobus pensilis prunevirus 2765862 Viruses Viruses 138 1.26e-39   NR DAF42475.1 2765862 g111896 i0 83.8 0.991735537190083 80 13 99.2 0 242 3 74 153 DAF42475.1 TPA_exp: movement protein, partial [Glyptostrobus pensilis prunevirus] diamond 240 138 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Prunevirus Glyptostrobus pensilis prunevirus
28830059 28830059 PRJNA611476_P_NODE_87868_length_249_cov_0.875000_g87077_i0 PRJNA611476 87868 249 0.875 2.17875 Prunevirus 1914295 Viruses Viruses 102 2.97e-23   NR BBH55948.1 2560282 g87077 i0 57.3 1.80722891566265 75 32 90.4 0 23 247 168 242 BBH55948.1 movement protein [Actinidia seed borne latent virus] diamond 450 102 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Prunevirus Prunevirus actinidiae
28880131 28880131 PRJNA611476_P_NODE_33348_length_361_cov_1.069444_g32557_i0 PRJNA611476 33348 361 1.069444 3.86069284 Daiswa trichovirus 1 2794435 Viruses Viruses 215 6.469999999999998e-69   NR QQG34597.1 2794435 g32557 i0 93.3 0.988919667590028 119 8 98.9 0 359 3 3 121 QQG34597.1 CP [Daiswa trichovirus 1] diamond 357 215 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Trichovirus Daiswa trichovirus 1
30978095 30978095 PRJNA611476_P_NODE_115574_length_241_cov_0.916667_g114783_i0 PRJNA611476 115574 241 0.916667 2.20916747 Prunevirus 1914295 Viruses Viruses 135 9.16e-36   NR BBH55948.1 2560282 g114783 i0 77.5 1.99170124481328 80 18 99.6 0 241 2 115 194 BBH55948.1 movement protein [Actinidia seed borne latent virus] diamond 480 135 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Prunevirus Prunevirus actinidiae
31534161 31534161 PRJNA611476_P_NODE_8516_length_665_cov_1.390203_g7741_i0 PRJNA611476 8516 665 1.390203 9.24484995 Actinidia seed borne latent virus 2560282 Viruses Viruses 192 7.580000000000001e-58   NR YP_009553505.1 2560282 g7741 i0 59.1 1.43458646616541 159 63 71.7 1 189 665 1 157 YP_009553505.1 coat protein [Actinidia seed borne latent virus] diamond 954 192 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Prunevirus Prunevirus actinidiae
32135109 32135109 PRJNA611476_P_NODE_20658_length_439_cov_1.196721_g19867_i0 PRJNA611476 20658 439 1.196721 5.25360519 Glyptostrobus pensilis prunevirus 2765862 Viruses Viruses 109 1.5800000000000002e-27   NR DAF42478.1 2765862 g19867 i0 52.5 0.690205011389522 101 47 69 1 432 130 26 125 DAF42478.1 TPA_exp: nucleic acid binding protein [Glyptostrobus pensilis prunevirus] diamond 303 109 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Prunevirus Glyptostrobus pensilis prunevirus
32293590 32293590 PRJNA611476_P_NODE_60619_length_284_cov_1.094787_g59828_i0 PRJNA611476 60619 284 1.094787 3.10919508 Daiswa trichovirus 1 2794435 Viruses Viruses 167 7.66e-46   NR QQG34598.1 2794435 g59828 i0 92 0.919014084507042 87 7 91.9 0 283 23 1175 1261 QQG34598.1 RdRp [Daiswa trichovirus 1] diamond 261 167 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Trichovirus Daiswa trichovirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;