RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA611476" and tax_phylum = "Fidelibacterota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA611476 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20991999 20991999 PRJNA611476_P_NODE_54997_length_295_cov_1.247748_g54206_i0 PRJNA611476 54997 295 1.247748 3.6808566 Fidelibacterota bacterium 2026760 Bacteria Bacteria 56.5 0.002   NTclustered gi|2108350698|gb|CP070656.1| 2026760 g54206 i0 96.97 0.223728813559322 33 1 11 0 236 268 1757056 1757088 MAG: Fidelibacterota bacterium isolate bin809 chromosome blastn 66 56.5 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
32306607 32306607 PRJNA611476_P_NODE_70559_length_265_cov_1.625000_g69768_i0 PRJNA611476 70559 265 1.625 4.30625 Pseudomonadati 3379134 Bacteria Bacteria 65.5 4.72e-10   NR MEE3152976.1 2026760 g69768 i0 41.7 2.30943396226415 72 42 81.5 0 40 255 8 79 MEE3152976.1 M28 family metallopeptidase [Fidelibacterota bacterium] diamond 612 65.9 0.993930197268589 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
32735580 32735580 PRJNA611476_P_NODE_95440_length_247_cov_0.885057_g94649_i0 PRJNA611476 95440 247 0.885057 2.18609079 Fidelibacterota bacterium 2026760 Bacteria Bacteria 122 9.539999999999998e-31   NR HIM73637.1 2026760 g94649 i0 61.7 2.95141700404858 81 31 98.4 0 243 1 239 319 HIM73637.1 peptidase M28 family protein [Fidelibacterota bacterium] diamond 729 122 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
32892629 32892629 PRJNA611476_P_NODE_118600_length_238_cov_2.151515_g117809_i0 PRJNA611476 118600 238 2.151515 5.1206057 Fidelibacterota bacterium 2026760 Bacteria Bacteria 75.5 1.03e-13   NR HCK99451.1 2026760 g117809 i0 46.3 1.00840336134454 80 40 97.1 1 234 4 590 669 HCK99451.1 beta-glucosidase [Fidelibacterota bacterium] diamond 240 75.5 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;