contig_metadata
14 rows where bioproject = "PRJNA611476" and tax_phylum = "Chlamydiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 588958 | 588958 | PRJNA611476_P_NODE_110761_length_243_cov_0.905882_g109970_i0 | PRJNA611476 | 110761 | 243 | 0.905882 | 2.20129326 | Candidatus Parilichlamydia sp. CR160513-20 | 1803833 | Bacteria | Bacteria | 263 | 9.3e-66 | NTclustered | gi|1000729704|gb|KT158463.1| | 1803833 | g109970 | i0 | 86.585 | 43.1851851851852 | 246 | 24 | 100 | 7 | 1 | 243 | 1916 | 1677 | Chlamydiales bacterium CR160513-20 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 10494 | 263 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Candidatus Parilichlamydiaceae | Candidatus Parilichlamydia | Candidatus Parilichlamydia sp. CR160513-20 | |
| 27522471 | 27522471 | PRJNA611476_P_NODE_17123_length_477_cov_3.049505_g16333_i0 | PRJNA611476 | 17123 | 477 | 3.049505 | 14.54613885 | Chlamydiales bacterium | 2047757 | Bacteria | Bacteria | 140 | 4.4399999999999997e-39 | NR | MCP5470421.1 | 2047757 | g16333 | i0 | 52 | 2.72327044025157 | 148 | 65 | 91.8 | 2 | 477 | 40 | 14 | 157 | MCP5470421.1 hypothetical protein [Chlamydiales bacterium] | diamond | 1299 | 140 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium | |||
| 27933037 | 27933037 | PRJNA611476_P_NODE_65445_length_275_cov_1.346535_g64654_i0 | PRJNA611476 | 65445 | 275 | 1.346535 | 3.70297125 | Criblamydia sequanensis | 340071 | Bacteria | Bacteria | 105 | 5.43e-24 | NR | WP_041017764.1 | 340071 | g64654 | i0 | 63.3 | 0.861818181818182 | 79 | 27 | 84 | 1 | 43 | 273 | 20 | 98 | WP_041017764.1 sulfatase-like hydrolase/transferase [Criblamydia sequanensis] | diamond | 237 | 105 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Candidatus Criblamydiaceae | Candidatus Criblamydia | Candidatus Criblamydia sequanensis | |
| 29745588 | 29745588 | PRJNA611476_P_NODE_98870_length_246_cov_0.890173_g98079_i0 | PRJNA611476 | 98870 | 246 | 0.890173 | 2.18982558 | root | 1 | Root_unresolved | Root_unresolved | 79 | 6.39e-15 | NR | MCB1076117.1 | 34094 | g98079 | i0 | 49.4 | 2.97560975609756 | 81 | 41 | 98.8 | 0 | 4 | 246 | 190 | 270 | MCB1076117.1 enoyl-CoA hydratase/isomerase family protein [Simkania sp.] | diamond | 732 | 79 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Simkaniaceae | Simkania | Simkania sp. | |
| 31375880 | 31375880 | PRJNA611476_P_NODE_22156_length_426_cov_0.872521_g21365_i0 | PRJNA611476 | 22156 | 426 | 0.872521 | 3.71693946 | Candidatus Protochlamydia naegleriophila | 389348 | Bacteria | Bacteria | 60.1 | 2.08e-7 | NR | WP_059061088.1 | 389348 | g21365 | i0 | 37.6 | 0.711267605633803 | 101 | 45 | 59.9 | 3 | 257 | 3 | 194 | 292 | WP_059061088.1 hypothetical protein [Candidatus Protochlamydia naegleriophila] | diamond | 303 | 60.1 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia naegleriophila | |
| 31375908 | 31375908 | PRJNA611476_P_NODE_53996_length_297_cov_3.022321_g53205_i0 | PRJNA611476 | 53996 | 297 | 3.022321 | 8.97629337 | Chlamydiota bacterium | 2081524 | Bacteria | Bacteria | 50.1 | 1.86e-4 | NR | NBU62582.1 | 2081524 | g53205 | i0 | 33.6 | 1.11111111111111 | 110 | 49 | 100 | 3 | 297 | 1 | 152 | 248 | NBU62582.1 hypothetical protein [Chlamydiota bacterium] | diamond | 330 | 50.1 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiota bacterium | |||||
| 31597494 | 31597494 | PRJNA611476_P_NODE_99216_length_246_cov_0.890173_g98425_i0 | PRJNA611476 | 99216 | 246 | 0.890173 | 2.18982558 | Simkania sp. | 34094 | Bacteria | Bacteria | 63.5 | 5.38e-10 | NR | MCB1084431.1 | 34094 | g98425 | i0 | 54.4 | 0.695121951219512 | 57 | 26 | 69.5 | 0 | 238 | 68 | 70 | 126 | MCB1084431.1 hypothetical protein [Simkania sp.] | diamond | 171 | 63.5 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Simkaniaceae | Simkania | Simkania sp. | |
| 32103363 | 32103363 | PRJNA611476_P_NODE_99038_length_246_cov_0.890173_g98247_i0 | PRJNA611476 | 99038 | 246 | 0.890173 | 2.18982558 | Parachlamydiaceae bacterium | 2052176 | Bacteria | Bacteria | 148 | 4.25e-41 | NR | MFV0339878.1 | 2052176 | g98247 | i0 | 86.6 | 1 | 82 | 11 | 100 | 0 | 1 | 246 | 228 | 309 | MFV0339878.1 FtsW/RodA/SpoVE family cell cycle protein [Parachlamydiaceae bacterium] | diamond | 246 | 148 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydiaceae bacterium | ||
| 32515007 | 32515007 | PRJNA611476_P_NODE_82759_length_250_cov_0.870056_g81968_i0 | PRJNA611476 | 82759 | 250 | 0.870056 | 2.17514 | Chlamydia psittaci | 83554 | Bacteria | Bacteria | 40.4 | 0.0273 | NR | EPJ27355.1 | 1112269 | g81968 | i0 | 42 | 1.08 | 50 | 29 | 60 | 0 | 194 | 45 | 2 | 51 | EPJ27355.1 nef attachable domain protein [Chlamydia psittaci 09DC78] | diamond | 270 | 40.4 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiaceae | Chlamydia | Chlamydia psittaci | |
| 32748394 | 32748394 | PRJNA611476_P_NODE_110720_length_243_cov_0.905882_g109929_i0 | PRJNA611476 | 110720 | 243 | 0.905882 | 2.20129326 | PVC group | 1783257 | Bacteria | Bacteria | 65.5 | 3.57e-10 | NR | MBI1871333.1 | 2081524 | g109929 | i0 | 55.2 | 2.76543209876543 | 67 | 28 | 80.2 | 1 | 196 | 2 | 358 | 424 | MBI1871333.1 hypothetical protein [Chlamydiota bacterium] | diamond | 672 | 65.5 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiota bacterium | |||||
| 32766776 | 32766776 | PRJNA611476_P_NODE_73040_length_260_cov_1.946524_g72249_i0 | PRJNA611476 | 73040 | 260 | 1.946524 | 5.0609624 | Chlamydia psittaci | 83554 | Bacteria | Bacteria | 47 | 1.25e-4 | NR | EPJ15322.1 | 1112256 | g72249 | i0 | 76.9 | 1.2 | 26 | 6 | 30 | 0 | 141 | 64 | 13 | 38 | EPJ15322.1 retrovirus-related Pol polyLINE-1 domain protein, partial [Chlamydia psittaci 02DC18] | diamond | 312 | 47 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiaceae | Chlamydia | Chlamydia psittaci | |
| 32829883 | 32829883 | PRJNA611476_P_NODE_45580_length_320_cov_1.214575_g44789_i0 | PRJNA611476 | 45580 | 320 | 1.214575 | 3.88664 | Chlamydiales bacterium | 2047757 | Bacteria | Bacteria | 99 | 9.41e-24 | NR | MCP5470420.1 | 2047757 | g44789 | i0 | 72.2 | 0.740625 | 79 | 22 | 74.1 | 0 | 70 | 306 | 58 | 136 | MCP5470420.1 ribosomal protein L24e family protein [Chlamydiales bacterium] | diamond | 237 | 99 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium | |||
| 32861303 | 32861303 | PRJNA611476_P_NODE_82140_length_250_cov_0.870056_g81349_i0 | PRJNA611476 | 82140 | 250 | 0.870056 | 2.17514 | Simkaniaceae bacterium | 2698248 | Bacteria | Bacteria | 52.8 | 7.61e-7 | NR | MBP9842320.1 | 2698248 | g81349 | i0 | 41.9 | 0.888 | 74 | 42 | 87.6 | 1 | 3 | 221 | 7 | 80 | MBP9842320.1 hypothetical protein [Simkaniaceae bacterium] | diamond | 222 | 52.8 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Simkaniaceae | Simkaniaceae bacterium | ||
| 32874299 | 32874299 | PRJNA611476_P_NODE_44060_length_324_cov_1.729084_g43269_i0 | PRJNA611476 | 44060 | 324 | 1.729084 | 5.60223216 | Chlamydia | 810 | Bacteria | Bacteria | 50.8 | 5.87e-6 | NR | EPP30691.1 | 1112248 | g43269 | i0 | 61 | 0.759259259259259 | 41 | 16 | 38 | 0 | 172 | 50 | 11 | 51 | EPP30691.1 nef attachable domain protein [Chlamydia psittaci C1/97] | diamond | 246 | 50.8 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiaceae | Chlamydia | Chlamydia psittaci |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;