RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA611476", tax_kingdom = "Thermotogati" and tax_phylum = "Synergistota"

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tax_superkingdom 1

tax_phylum 1

  • Synergistota · 2 ✖

tax_kingdom 1

  • Thermotogati · 2 ✖

bioproject 1

  • PRJNA611476 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28280190 28280190 PRJNA611476_P_NODE_94086_length_247_cov_0.885057_g93295_i0 PRJNA611476 94086 247 0.885057 2.18609079 uncultured Cloacibacillus sp. 889794 Bacteria Bacteria 165 1.64e-49   NR WP_303149558.1 889794 g93295 i0 98.8 0.995951417004049 82 1 99.6 0 247 2 92 173 WP_303149558.1 hypothetical protein [uncultured Cloacibacillus sp.] diamond 246 165 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae Cloacibacillus uncultured Cloacibacillus sp.
29019914 29019914 PRJNA611476_P_NODE_43268_length_327_cov_0.909449_g42477_i0 PRJNA611476 43268 327 0.909449 2.97389823 Synergistes 2753 Bacteria Bacteria 44.3 0.0286   NR NLD06472.1 2053624 g42477 i0 29.4 4.67889908256881 85 46 78 3 43 297 153 223 NLD06472.1 glutamine synthetase type III [Synergistaceae bacterium] diamond 1530 44.7 0.991051454138702 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;