contig_metadata
35 rows where bioproject = "PRJNA611476", tax_kingdom = "Pseudomonadati" and tax_phylum = "Campylobacterota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1865948 | 1865948 | PRJNA611476_P_NODE_8142_length_680_cov_3.504119_g7368_i0 | PRJNA611476 | 8142 | 680 | 3.504119 | 23.8280092 | Aliarcobacter cryaerophilus | 28198 | Bacteria | Bacteria | 356 | 7.490000000000001e-122 | NR | WP_260949482.1 | 28198 | g7368 | i0 | 78.5 | 0.966176470588235 | 219 | 41 | 95.7 | 3 | 28 | 678 | 1 | 215 | WP_260949482.1 glycoside hydrolase family 19 protein, partial [Aliarcobacter cryaerophilus] | diamond | 657 | 356 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Aliarcobacter | Aliarcobacter cryaerophilus | ||
| 2423531 | 2423531 | PRJNA611476_P_NODE_84082_length_250_cov_0.870056_g83291_i0 | PRJNA611476 | 84082 | 250 | 0.870056 | 2.17514 | Bacteria | 2 | Bacteria | Bacteria | 462 | 8.83e-126 | NTclustered | gi|2562786027|gb|CP120256.1| | 197 | g83291 | i0 | 100 | 101 | 250 | 0 | 100 | 0 | 1 | 250 | 1483332 | 1483581 | Campylobacter jejuni strain PS_41_2021 chromosome, complete genome | blastn | 25250 | 462 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 4975885 | 4975885 | PRJNA611476_P_NODE_21084_length_435_cov_1.472376_g20293_i0 | PRJNA611476 | 21084 | 435 | 1.472376 | 6.4048356 | root | 1 | Root_unresolved | Root_unresolved | 804 | 0 | NTclustered | gi|2562786027|gb|CP120256.1| | 197 | g20293 | i0 | 100 | 102.004597701149 | 435 | 0 | 100 | 0 | 1 | 435 | 1303903 | 1303469 | Campylobacter jejuni strain PS_41_2021 chromosome, complete genome | blastn | 44372 | 804 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 4976517 | 4976517 | PRJNA611476_P_NODE_96944_length_246_cov_0.890173_g96153_i0 | PRJNA611476 | 96944 | 246 | 0.890173 | 2.18982558 | Campylobacter jejuni | 197 | Bacteria | Bacteria | 153 | 1.14e-45 | NR | HFZ5126867.1 | 197 | g96153 | i0 | 93.9 | 8 | 82 | 5 | 100 | 0 | 246 | 1 | 57 | 138 | HFZ5126867.1 transposase [Campylobacter jejuni] | diamond | 1968 | 153 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 5692978 | 5692978 | PRJNA611476_P_NODE_33965_length_358_cov_1.905263_g33174_i0 | PRJNA611476 | 33965 | 358 | 1.905263 | 6.82084154 | Campylobacter coli | 195 | Bacteria | Bacteria | 204 | 8.959999999999999e-66 | NR | WP_240369566.1 | 195 | g33174 | i0 | 100 | 0.82122905027933 | 98 | 0 | 82.1 | 0 | 295 | 2 | 1 | 98 | WP_240369566.1 hypothetical protein, partial [Campylobacter coli] | diamond | 294 | 204 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli | ||
| 6251550 | 6251550 | PRJNA611476_P_NODE_29565_length_378_cov_1.259016_g28774_i0 | PRJNA611476 | 29565 | 378 | 1.259016 | 4.75908048 | root | 1 | Root_unresolved | Root_unresolved | 699 | 0 | NTclustered | gi|1248684020|gb|CP023546.1| | 195 | g28774 | i0 | 100 | 104 | 378 | 0 | 100 | 0 | 1 | 378 | 23939 | 23562 | Campylobacter coli strain CFSAN032805 plasmid pCFSAN032805_1, complete sequence | blastn | 39312 | 699 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli | ||
| 8800396 | 8800396 | PRJNA611476_P_NODE_101107_length_245_cov_0.895349_g100316_i0 | PRJNA611476 | 101107 | 245 | 0.895349 | 2.19360505 | Bacteria | 2 | Bacteria | Bacteria | 448 | 2.41e-121 | NTclustered | gi|2323232558|gb|CP109813.1| | 195 | g100316 | i0 | 99.592 | 102 | 245 | 1 | 100 | 0 | 1 | 245 | 559552 | 559796 | Campylobacter coli strain CC20JX12 chromosome, complete genome | blastn | 24990 | 448 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli | ||
| 8801129 | 8801129 | PRJNA611476_P_NODE_78327_length_251_cov_0.865169_g77536_i0 | PRJNA611476 | 78327 | 251 | 0.865169 | 2.17157419 | root | 1 | Root_unresolved | Root_unresolved | 464 | 2.47e-126 | NTclustered | gi|2562786027|gb|CP120256.1| | 197 | g77536 | i0 | 100 | 111.892430278884 | 251 | 0 | 100 | 0 | 1 | 251 | 1482540 | 1482290 | Campylobacter jejuni strain PS_41_2021 chromosome, complete genome | blastn | 28085 | 464 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 11351430 | 11351430 | PRJNA611476_P_NODE_44969_length_322_cov_0.931727_g44178_i0 | PRJNA611476 | 44969 | 322 | 0.931727 | 3.00016094 | Bacteria | 2 | Bacteria | Bacteria | 590 | 5.18e-164 | NTclustered | gi|2473671727|gb|CP047214.1| | 195 | g44178 | i0 | 99.689 | 342.953416149068 | 322 | 1 | 100 | 0 | 1 | 322 | 614457 | 614136 | Campylobacter coli strain QL_1_15 chromosome, complete genome | blastn | 110431 | 595 | 0.991596638655462 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli | ||
| 13902214 | 13902214 | PRJNA611476_P_NODE_8131_length_681_cov_2.246711_g7358_i0 | PRJNA611476 | 8131 | 681 | 2.246711 | 15.30010191 | Aliarcobacter cryaerophilus | 28198 | Bacteria | Bacteria | 370 | 1.75e-127 | NR | WP_260949482.1 | 28198 | g7358 | i0 | 78.9 | 1 | 227 | 44 | 99.6 | 2 | 3 | 680 | 7 | 230 | WP_260949482.1 glycoside hydrolase family 19 protein, partial [Aliarcobacter cryaerophilus] | diamond | 681 | 370 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Aliarcobacter | Aliarcobacter cryaerophilus | ||
| 14618660 | 14618660 | PRJNA611476_P_NODE_5872_length_797_cov_2.900552_g5127_i0 | PRJNA611476 | 5872 | 797 | 2.900552 | 23.11739944 | Aliarcobacter cryaerophilus | 28198 | Bacteria | Bacteria | 415 | 2.5299999999999993e-144 | NR | WP_260949482.1 | 28198 | g5127 | i0 | 77.1 | 0.986198243412798 | 262 | 54 | 97.9 | 3 | 3 | 782 | 7 | 264 | WP_260949482.1 glycoside hydrolase family 19 protein, partial [Aliarcobacter cryaerophilus] | diamond | 786 | 415 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Aliarcobacter | Aliarcobacter cryaerophilus | ||
| 15892398 | 15892398 | PRJNA611476_P_NODE_3913_length_984_cov_3.666301_g3238_i0 | PRJNA611476 | 3913 | 984 | 3.666301 | 36.07640184 | Aliarcobacter cryaerophilus | 28198 | Bacteria | Bacteria | 444 | 7.65e-155 | NR | WP_260949482.1 | 28198 | g3238 | i0 | 81.7 | 0.798780487804878 | 262 | 44 | 79.6 | 2 | 979 | 197 | 6 | 264 | WP_260949482.1 glycoside hydrolase family 19 protein, partial [Aliarcobacter cryaerophilus] | diamond | 786 | 444 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Aliarcobacter | Aliarcobacter cryaerophilus | ||
| 15892439 | 15892439 | PRJNA611476_P_NODE_4213_length_948_cov_5.408000_g3517_i0 | PRJNA611476 | 4213 | 948 | 5.408 | 51.26784 | Aliarcobacter cryaerophilus | 28198 | Bacteria | Bacteria | 446 | 5.86e-156 | NR | WP_260949482.1 | 28198 | g3517 | i0 | 82.1 | 0.832278481012658 | 263 | 41 | 82.6 | 3 | 946 | 164 | 6 | 264 | WP_260949482.1 glycoside hydrolase family 19 protein, partial [Aliarcobacter cryaerophilus] | diamond | 789 | 446 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Aliarcobacter | Aliarcobacter cryaerophilus | ||
| 16450653 | 16450653 | PRJNA611476_P_NODE_3533_length_1039_cov_3.181159_g2889_i0 | PRJNA611476 | 3533 | 1039 | 3.181159 | 33.05224201 | Campylobacter | 194 | Bacteria | Bacteria | 71.3 | 2.91e-7 | NTclustered | gi|777189043|emb|LN831025.1| | 197 | g2889 | i0 | 92 | 5.12704523580366 | 50 | 4 | 6 | 0 | 88 | 137 | 903397 | 903348 | Campylobacter jejuni genome assembly NCTC11351, chromosome : 1 | blastn | 5327 | 71.3 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 20274654 | 20274654 | PRJNA611476_P_NODE_75476_length_256_cov_1.262295_g74685_i0 | PRJNA611476 | 75476 | 256 | 1.262295 | 3.2314752 | Bacteria | 2 | Bacteria | Bacteria | 224 | 4.659999999999999e-54 | NTclustered | gi|2562721999|gb|CP120314.1| | 197 | g74685 | i0 | 87.692 | 86.734375 | 195 | 20 | 75 | 3 | 1 | 193 | 1302428 | 1302236 | Campylobacter jejuni strain PS_1_2021 chromosome, complete genome | blastn | 22204 | 224 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 22825196 | 22825196 | PRJNA611476_P_NODE_36758_length_348_cov_1.036364_g35967_i0 | PRJNA611476 | 36758 | 348 | 1.036364 | 3.60654672 | root | 1 | Root_unresolved | Root_unresolved | 621 | 1.9999999999999997e-173 | NTclustered | gi|2562786027|gb|CP120256.1| | 197 | g35967 | i0 | 98.851 | 101 | 348 | 4 | 100 | 0 | 1 | 348 | 1303259 | 1302912 | Campylobacter jejuni strain PS_41_2021 chromosome, complete genome | blastn | 35148 | 621 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 27080140 | 27080140 | PRJNA611476_P_NODE_102502_length_245_cov_0.895349_g101711_i0 | PRJNA611476 | 102502 | 245 | 0.895349 | 2.19360505 | Campylobacter coli | 195 | Bacteria | Bacteria | 84.7 | 8.34e-19 | NR | RJF74233.1 | 195 | g101711 | i0 | 66.1 | 0.759183673469388 | 62 | 21 | 75.9 | 0 | 197 | 12 | 12 | 73 | RJF74233.1 endonuclease, partial [Campylobacter coli] | diamond | 186 | 84.7 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli | ||
| 27806911 | 27806911 | PRJNA611476_P_NODE_104204_length_244_cov_1.251462_g103413_i0 | PRJNA611476 | 104204 | 244 | 1.251462 | 3.05356728 | Helicobacter pylori | 210 | Bacteria | Bacteria | 62.4 | 7.58e-11 | NR | GAA9036680.1 | 210 | g103413 | i0 | 86.5 | 0.909836065573771 | 37 | 5 | 45.5 | 0 | 3 | 113 | 1 | 37 | GAA9036680.1 hypothetical protein Kyoto181A_9030 [Helicobacter pylori] | diamond | 222 | 62.4 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 28469959 | 28469959 | PRJNA611476_P_NODE_68706_length_269_cov_1.198980_g67915_i0 | PRJNA611476 | 68706 | 269 | 1.19898 | 3.2252562 | Sulfurospirillum multivorans | 66821 | Bacteria | Bacteria | 131 | 3.1999999999999995e-36 | NR | WP_038533315.1 | 66821 | g67915 | i0 | 76.4 | 0.992565055762082 | 89 | 21 | 99.3 | 0 | 2 | 268 | 81 | 169 | WP_038533315.1 LysE family translocator [Sulfurospirillum multivorans] | diamond | 267 | 131 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurospirillaceae | Sulfurospirillum | Sulfurospirillum multivorans | ||
| 28911558 | 28911558 | PRJNA611476_P_NODE_98168_length_246_cov_0.890173_g97377_i0 | PRJNA611476 | 98168 | 246 | 0.890173 | 2.18982558 | Helicobacter pylori | 210 | Bacteria | Bacteria | 53.1 | 3.6e-7 | NR | GAA8910357.1 | 210 | g97377 | i0 | 68.1 | 3.71951219512195 | 47 | 15 | 57.3 | 0 | 219 | 79 | 12 | 58 | GAA8910357.1 hypothetical protein Kyoto166A_1960 [Helicobacter pylori] | diamond | 915 | 53.1 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 29006912 | 29006912 | PRJNA611476_P_NODE_4048_length_967_cov_2.287472_g3365_i0 | PRJNA611476 | 4048 | 967 | 2.287472 | 22.11985424 | Aliarcobacter cryaerophilus | 28198 | Bacteria | Bacteria | 449 | 6.609999999999998e-157 | NR | WP_260949482.1 | 28198 | g3365 | i0 | 83.3 | 0.797311271975181 | 257 | 42 | 79.7 | 1 | 1 | 771 | 9 | 264 | WP_260949482.1 glycoside hydrolase family 19 protein, partial [Aliarcobacter cryaerophilus] | diamond | 771 | 449 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Aliarcobacter | Aliarcobacter cryaerophilus | ||
| 29543220 | 29543220 | PRJNA611476_P_NODE_70670_length_265_cov_1.468750_g69879_i0 | PRJNA611476 | 70670 | 265 | 1.46875 | 3.8921875 | Helicobacter pylori | 210 | Bacteria | Bacteria | 43.9 | 0.00139 | NR | GAA9110009.1 | 210 | g69879 | i0 | 51.2 | 0.781132075471698 | 41 | 20 | 46.4 | 0 | 61 | 183 | 9 | 49 | GAA9110009.1 hypothetical protein Kyoto184A_09800 [Helicobacter pylori] | diamond | 207 | 43.9 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 29574630 | 29574630 | PRJNA611476_P_NODE_29450_length_379_cov_0.830065_g28659_i0 | PRJNA611476 | 29450 | 379 | 0.830065 | 3.14594635 | Helicobacter pylori | 210 | Bacteria | Bacteria | 65.1 | 3.28e-11 | NR | GAA9180441.1 | 210 | g28659 | i0 | 75.6 | 0.324538258575198 | 41 | 10 | 32.5 | 0 | 24 | 146 | 4 | 44 | GAA9180441.1 hypothetical protein Kyoto193A_2360 [Helicobacter pylori] | diamond | 123 | 65.1 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 29637634 | 29637634 | PRJNA611476_P_NODE_30170_length_375_cov_1.019868_g29379_i0 | PRJNA611476 | 30170 | 375 | 1.019868 | 3.824505 | Arcobacter sp. LA11 | 1898176 | Bacteria | Bacteria | 65.1 | 8.3e-10 | NR | WP_072682613.1 | 1898176 | g29379 | i0 | 32.7 | 1.488 | 104 | 65 | 83.2 | 1 | 371 | 60 | 113 | 211 | WP_072682613.1 MOSC domain-containing protein [Arcobacter sp. LA11] | diamond | 558 | 65.1 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Arcobacter | Arcobacter sp. LA11 | ||
| 29637647 | 29637647 | PRJNA611476_P_NODE_43310_length_327_cov_0.846457_g42519_i0 | PRJNA611476 | 43310 | 327 | 0.846457 | 2.76791439 | Campylobacterales bacterium | 2268180 | Bacteria | Bacteria | 124 | 1.01e-31 | NR | MBD3842266.1 | 2268180 | g42519 | i0 | 62 | 1.11009174311927 | 121 | 33 | 99.1 | 3 | 3 | 326 | 25 | 145 | MBD3842266.1 glycosyltransferase [Campylobacterales bacterium] | diamond | 363 | 124 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacterales bacterium | ||||
| 29637694 | 29637694 | PRJNA611476_P_NODE_90750_length_248_cov_0.880000_g89959_i0 | PRJNA611476 | 90750 | 248 | 0.88 | 2.1824 | Helicobacter sp. | 218 | Bacteria | Bacteria | 152 | 1.45e-41 | NR | MDE6978001.1 | 218 | g89959 | i0 | 96.3 | 0.991935483870968 | 82 | 3 | 99.2 | 0 | 3 | 248 | 253 | 334 | MDE6978001.1 methionine--tRNA ligase [Helicobacter sp.] | diamond | 246 | 152 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter sp. | ||
| 30648646 | 30648646 | PRJNA611476_P_NODE_27773_length_387_cov_2.754777_g26982_i0 | PRJNA611476 | 27773 | 387 | 2.754777 | 10.66098699 | Aliarcobacter cryaerophilus | 28198 | Bacteria | Bacteria | 104 | 1.4699999999999999e-24 | NR | WP_260949482.1 | 28198 | g26982 | i0 | 85.5 | 0.426356589147287 | 55 | 8 | 42.6 | 0 | 386 | 222 | 210 | 264 | WP_260949482.1 glycoside hydrolase family 19 protein, partial [Aliarcobacter cryaerophilus] | diamond | 165 | 104 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Aliarcobacter | Aliarcobacter cryaerophilus | ||
| 30838487 | 30838487 | PRJNA611476_P_NODE_50734_length_306_cov_1.133047_g49943_i0 | PRJNA611476 | 50734 | 306 | 1.133047 | 3.46712382 | Helicobacter pylori | 210 | Bacteria | Bacteria | 73.2 | 3.63e-14 | NR | GAA6899797.1 | 210 | g49943 | i0 | 60.9 | 0.627450980392157 | 64 | 25 | 62.7 | 0 | 286 | 95 | 54 | 117 | GAA6899797.1 hypothetical protein Kyoto207A_1280 [Helicobacter pylori] | diamond | 192 | 73.2 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 31230557 | 31230557 | PRJNA611476_P_NODE_109935_length_243_cov_0.905882_g109144_i0 | PRJNA611476 | 109935 | 243 | 0.905882 | 2.20129326 | root | 1 | Root_unresolved | Root_unresolved | 139 | 2.52e-36 | NR | WP_334089831.1 | 76936 | g109144 | i0 | 80 | 1.97530864197531 | 80 | 16 | 98.8 | 0 | 3 | 242 | 383 | 462 | WP_334089831.1 DNA polymerase, partial [Helicobacter typhlonius] | diamond | 480 | 139 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter typhlonius | ||
| 31249173 | 31249173 | PRJNA611476_P_NODE_114655_length_242_cov_0.899408_g113864_i0 | PRJNA611476 | 114655 | 242 | 0.899408 | 2.17656736 | Helicobacter pylori | 210 | Bacteria | Bacteria | 55.5 | 8.7e-7 | NR | GAA6795622.1 | 210 | g113864 | i0 | 63 | 2.29338842975207 | 46 | 17 | 57 | 0 | 210 | 73 | 188 | 233 | GAA6795622.1 hypothetical protein Kyoto200A_0460 [Helicobacter pylori] | diamond | 555 | 55.5 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 31470804 | 31470804 | PRJNA611476_P_NODE_113276_length_242_cov_0.911243_g112485_i0 | PRJNA611476 | 113276 | 242 | 0.911243 | 2.20520806 | Wolinella succinogenes | 844 | Bacteria | Bacteria | 135 | 9.34e-35 | NR | WP_011138781.1 | 844 | g112485 | i0 | 86.1 | 0.979338842975207 | 79 | 11 | 97.9 | 0 | 3 | 239 | 21 | 99 | WP_011138781.1 ATP-dependent helicase [Wolinella succinogenes] | diamond | 237 | 135 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Wolinella | Wolinella succinogenes | ||
| 31610356 | 31610356 | PRJNA611476_P_NODE_71576_length_263_cov_1.621053_g70785_i0 | PRJNA611476 | 71576 | 263 | 1.621053 | 4.26336939 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 64.3 | 1.1e-11 | NR | WP_013681118.1 | 84405 | g70785 | i0 | 70.5 | 3.50190114068441 | 44 | 13 | 50.2 | 0 | 90 | 221 | 1 | 44 | WP_013681118.1 50S ribosomal protein L34 [Hippea maritima] | diamond | 921 | 64.7 | 0.993817619783617 | Bacteria | Pseudomonadati | Campylobacterota | Desulfurellia | Desulfurellales | Hippeaceae | Hippea | Hippea maritima | ||
| 31723606 | 31723606 | PRJNA611476_P_NODE_116697_length_241_cov_0.916667_g115906_i0 | PRJNA611476 | 116697 | 241 | 0.916667 | 2.20916747 | Helicobacter sp. | 218 | Bacteria | Bacteria | 164 | 3.5999999999999995e-48 | NR | WP_321061646.1 | 218 | g115906 | i0 | 100 | 1.99170124481328 | 80 | 0 | 99.6 | 0 | 1 | 240 | 97 | 176 | WP_321061646.1 adenosylmethionine--8-amino-7-oxononanoate transaminase, partial [Helicobacter sp.] | diamond | 480 | 164 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter sp. | ||
| 31755250 | 31755250 | PRJNA611476_P_NODE_109697_length_243_cov_0.905882_g108906_i0 | PRJNA611476 | 109697 | 243 | 0.905882 | 2.20129326 | Campylobacterales bacterium | 2268180 | Bacteria | Bacteria | 100 | 3.9e-24 | NR | HRF57702.1 | 2268180 | g108906 | i0 | 84.6 | 0.641975308641975 | 52 | 8 | 64.2 | 0 | 3 | 158 | 168 | 219 | HRF57702.1 response regulator transcription factor [Campylobacterales bacterium] | diamond | 156 | 100 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacterales bacterium | ||||
| 32609465 | 32609465 | PRJNA611476_P_NODE_86360_length_249_cov_0.875000_g85569_i0 | PRJNA611476 | 86360 | 249 | 0.875 | 2.17875 | Campylobacteraceae bacterium | 2268179 | Bacteria | Bacteria | 50.1 | 1.02e-4 | NR | NLC28290.1 | 2268179 | g85569 | i0 | 35.3 | 2.55421686746988 | 68 | 39 | 81.9 | 1 | 248 | 45 | 432 | 494 | NLC28290.1 DUF2779 domain-containing protein [Campylobacteraceae bacterium] | diamond | 636 | 50.1 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacteraceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;