RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

20 rows where bioproject = "PRJNA611476", tax_clade = "Sar" and tax_phylum = "Foraminifera"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Foraminifera · 20 ✖

tax_clade 1

  • Sar · 20 ✖

bioproject 1

  • PRJNA611476 · 20 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6967328 6967328 PRJNA611476_P_NODE_115446_length_241_cov_0.916667_g114655_i0 PRJNA611476 115446 241 0.916667 2.20916747 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 103 1e-24   NR ETO07542.1 46433 g114655 i0 59.5 0.983402489626556 79 32 98.3 0 238 2 36 114 ETO07542.1 hypothetical protein RFI_29850 [Reticulomyxa filosa] diamond 237 103 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
26827126 26827126 PRJNA611476_P_NODE_102701_length_245_cov_0.895349_g101910_i0 PRJNA611476 102701 245 0.895349 2.19360505 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 69.7 6.2e-12   NR ETO24498.1 46433 g101910 i0 44.3 2.14285714285714 88 39 98 3 243 4 122 207 ETO24498.1 mitogen activated kinase-like protein, partial [Reticulomyxa filosa] diamond 525 69.7 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
26859026 26859026 PRJNA611476_P_NODE_25081_length_404_cov_1.293051_g24290_i0 PRJNA611476 25081 404 1.293051 5.22392604 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 142 9.29e-37   NR ETO25964.1 46433 g24290 i0 53 0.995049504950495 134 61 98.8 2 2 400 355 487 ETO25964.1 peptidase S15 [Reticulomyxa filosa] diamond 402 142 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
27409534 27409534 PRJNA611476_P_NODE_100183_length_245_cov_1.750000_g99392_i0 PRJNA611476 100183 245 1.75 4.2875 Pelagomonadales 54409 SAR_Eukaryotes SAR_Eukaryotes 43.1 0.0278   NR ETO26740.1 46433 g99392 i0 31.3 3.85714285714286 80 45 91.8 3 21 245 184 258 ETO26740.1 hypothetical protein RFI_10394 [Reticulomyxa filosa] diamond 945 43.5 0.990804597701149 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
27428087 27428087 PRJNA611476_P_NODE_66223_length_274_cov_0.995025_g65432_i0 PRJNA611476 66223 274 0.995025 2.7263685 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 91.7 1.54e-19   NR ETO35417.1 46433 g65432 i0 46.1 0.974452554744526 89 48 97.4 0 6 272 270 358 ETO35417.1 hypothetical protein RFI_01646 [Reticulomyxa filosa] diamond 267 91.7 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
27522483 27522483 PRJNA611476_P_NODE_30963_length_371_cov_1.453020_g30172_i0 PRJNA611476 30963 371 1.45302 5.3907042 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 51.6 1.23e-4   NR ETO06651.1 46433 g30172 i0 45.3 1.73854447439353 53 29 42.9 0 1 159 746 798 ETO06651.1 hypothetical protein RFI_30741, partial [Reticulomyxa filosa] diamond 645 51.6 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
27553847 27553847 PRJNA611476_P_NODE_111884_length_242_cov_0.911243_g111093_i0 PRJNA611476 111884 242 0.911243 2.20520806 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 77.4 2.23e-14   NR ETO23319.1 46433 g111093 i0 53.7 0.669421487603306 54 25 66.9 0 3 164 214 267 ETO23319.1 hypothetical protein RFI_13860 [Reticulomyxa filosa] diamond 162 77.4 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
27617404 27617404 PRJNA611476_P_NODE_22404_length_424_cov_1.096866_g21613_i0 PRJNA611476 22404 424 1.096866 4.65071184 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 170 1.22e-48   NR ETO17058.1 46433 g21613 i0 62.4 0.941037735849057 133 48 94.1 1 25 423 30 160 ETO17058.1 hypothetical protein RFI_20276 [Reticulomyxa filosa] diamond 399 170 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
27806967 27806967 PRJNA611476_P_NODE_48224_length_313_cov_0.891667_g47433_i0 PRJNA611476 48224 313 0.891667 2.79091771 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 109 1.19e-25   NR ETO00451.1 46433 g47433 i0 47.6 1.00638977635783 105 53 98.7 2 310 2 255 359 ETO00451.1 Beta-galactosidase [Reticulomyxa filosa] diamond 315 109 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
27882916 27882916 PRJNA611476_P_NODE_29865_length_376_cov_2.033003_g29074_i0 PRJNA611476 29865 376 2.033003 7.64409128 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 78.2 2.52e-15   NR ETO14766.1 46433 g29074 i0 65.4 4.01329787234043 52 18 41.5 0 374 219 104 155 ETO14766.1 hypothetical protein RFI_22603 [Reticulomyxa filosa] diamond 1509 78.2 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
27996227 27996227 PRJNA611476_P_NODE_103005_length_245_cov_0.895349_g102214_i0 PRJNA611476 103005 245 0.895349 2.19360505 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 58.5 9.37e-8   NR ETO25717.1 46433 g102214 i0 39.5 2.95102040816327 81 48 99.2 1 245 3 19 98 ETO25717.1 hypothetical protein RFI_11421 [Reticulomyxa filosa] diamond 723 58.5 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
27996308 27996308 PRJNA611476_P_NODE_67805_length_271_cov_1.161616_g67014_i0 PRJNA611476 67805 271 1.161616 3.14797936 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 140 6.76e-37   NR ETO11489.1 46433 g67014 i0 62.2 0.996309963099631 90 33 99.6 1 271 2 450 538 ETO11489.1 hypothetical protein RFI_25888 [Reticulomyxa filosa] diamond 270 140 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
28659350 28659350 PRJNA611476_P_NODE_52747_length_301_cov_1.013158_g51956_i0 PRJNA611476 52747 301 1.013158 3.04960558 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 60.1 4.14e-8   NR ETO05960.1 46433 g51956 i0 34.1 3.27906976744186 88 57 87.7 1 21 284 121 207 ETO05960.1 hypothetical protein RFI_31437, partial [Reticulomyxa filosa] diamond 987 60.1 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
28690962 28690962 PRJNA611476_P_NODE_105167_length_244_cov_0.900585_g104376_i0 PRJNA611476 105167 244 0.900585 2.1974274 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 91.7 2.23e-19   NR ETO24993.1 46433 g104376 i0 50 1.00819672131148 82 40 99.6 1 243 1 55 136 ETO24993.1 hypothetical protein RFI_12152, partial [Reticulomyxa filosa] diamond 246 91.7 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
28924756 28924756 PRJNA611476_P_NODE_66468_length_273_cov_1.440000_g65677_i0 PRJNA611476 66468 273 1.44 3.9312 root 1 Root_unresolved Root_unresolved 67.4 1.15e-10   NR ETO34622.1 46433 g65677 i0 43.8 1.87912087912088 80 44 87.9 1 240 1 399 477 ETO34622.1 hypothetical protein RFI_02467 [Reticulomyxa filosa] diamond 513 67.8 0.994100294985251 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
29385572 29385572 PRJNA611476_P_NODE_97769_length_246_cov_0.890173_g96978_i0 PRJNA611476 97769 246 0.890173 2.18982558 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 48.9 2.54e-4   NR ETO25807.1 46433 g96978 i0 45.8 0.585365853658537 48 25 57.3 1 196 56 7 54 ETO25807.1 hypothetical protein RFI_11329, partial [Reticulomyxa filosa] diamond 144 48.9 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
30535601 30535601 PRJNA611476_P_NODE_24813_length_406_cov_1.051051_g24022_i0 PRJNA611476 24813 406 1.051051 4.26726706 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 52.4 7.54e-5   NR ETO32916.1 46433 g24022 i0 48.9 1.43349753694581 47 22 33.3 1 259 125 81 127 ETO32916.1 hypothetical protein RFI_04200 [Reticulomyxa filosa] diamond 582 52.4 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
30598658 30598658 PRJNA611476_P_NODE_105753_length_244_cov_0.900585_g104962_i0 PRJNA611476 105753 244 0.900585 2.1974274 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 62.4 5.56e-10   NR ETO06965.1 46433 g104962 i0 41.3 3.61475409836066 75 40 87.3 2 222 10 66 140 ETO06965.1 hypothetical protein RFI_30425 [Reticulomyxa filosa] diamond 882 62.4 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
31280844 31280844 PRJNA611476_P_NODE_57115_length_290_cov_1.221198_g56324_i0 PRJNA611476 57115 290 1.221198 3.5414742 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 74.3 5.24e-13   NR ETO28195.1 46433 g56324 i0 38.7 1.9551724137931 93 56 95.2 1 276 1 705 797 ETO28195.1 Ubiquitin carboxyl-terminal hydrolase family protein, partial [Reticulomyxa filosa] diamond 567 74.3 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
32261900 32261900 PRJNA611476_P_NODE_63418_length_279_cov_1.121359_g62627_i0 PRJNA611476 63418 279 1.121359 3.12859161 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 47 0.0015   NR ETO21940.1 46433 g62627 i0 26.1 0.989247311827957 92 68 98.9 0 279 4 13 104 ETO21940.1 hypothetical protein RFI_15264 [Reticulomyxa filosa] diamond 276 47 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;