RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA611476", tax_clade = "Nitrospinota/Tectimicrobiota group" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 3 ✖

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Nitrospinota/Tectimicrobiota group · 3 ✖

bioproject 1

  • PRJNA611476 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26700203 26700203 PRJNA611476_P_NODE_88661_length_249_cov_0.875000_g87870_i0 PRJNA611476 88661 249 0.875 2.17875 Nitrospinota bacterium 2026769 Bacteria Bacteria 62.8 1.2e-9   NR MCH7922406.1 2026769 g87870 i0 50 2.16867469879518 60 30 72.3 0 68 247 2 61 MCH7922406.1 hypothetical protein [Nitrospinota bacterium] diamond 540 62.8 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota         Nitrospinota bacterium
27648939 27648939 PRJNA611476_P_NODE_2724_length_1199_cov_3.648313_g2149_i0 PRJNA611476 2724 1199 3.648313 43.74327287 Nitrospinaceae bacterium 2358456 Bacteria Bacteria 49.7 0.0182   NR MBL4665330.1 2358456 g2149 i0 34.1 0.220183486238532 88 54 21.5 2 1197 940 317 402 MBL4665330.1 hypothetical protein [Nitrospinaceae bacterium] diamond 264 49.7 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota Nitrospinia Nitrospinales Nitrospinaceae   Nitrospinaceae bacterium
32261854 32261854 PRJNA611476_P_NODE_12958_length_545_cov_1.459746_g12170_i0 PRJNA611476 12958 545 1.459746 7.9556157 Nitrospinota bacterium 2026769 Bacteria Bacteria 77 7.14e-13   NR MDH4183233.1 2026769 g12170 i0 42.4 1.01284403669725 92 53 50.6 0 545 270 165 256 MDH4183233.1 von Willebrand factor type A domain-containing protein [Nitrospinota bacterium] diamond 552 77 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota         Nitrospinota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;