RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA611476" and tax_clade = "Methanomada group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Methanomada group · 3 ✖

bioproject 1

  • PRJNA611476 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26763610 26763610 PRJNA611476_P_NODE_101021_length_245_cov_0.895349_g100230_i0 PRJNA611476 101021 245 0.895349 2.19360505 Methanosphaera sp. 2666342 Archaea Archaea 74.3 2.85e-13   NR MEE3417735.1 2666342 g100230 i0 56.7 1.46938775510204 60 24 73.5 1 3 182 627 684 MEE3417735.1 GH25 family lysozyme [Methanosphaera sp.] diamond 360 74.3 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanosphaera Methanosphaera sp.
28691051 28691051 PRJNA611476_P_NODE_94027_length_247_cov_0.885057_g93236_i0 PRJNA611476 94027 247 0.885057 2.18609079 Methanobrevibacter sp. 66852 Archaea Archaea 87.8 5.5e-18   NR MBR5503415.1 66852 g93236 i0 53.6 1.02024291497976 84 37 99.6 2 2 247 134 217 MBR5503415.1 ATP-dependent helicase [Methanobrevibacter sp.] diamond 252 87.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
31976787 31976787 PRJNA611476_P_NODE_93558_length_247_cov_0.885057_g92767_i0 PRJNA611476 93558 247 0.885057 2.18609079 Methanobrevibacter sp. 66852 Archaea Archaea 154 4.5499999999999995e-45   NR MDO5811423.1 66852 g92767 i0 90.1 0.983805668016194 81 8 98.4 0 3 245 27 107 MDO5811423.1 C1 family peptidase [Methanobrevibacter sp.] diamond 243 154 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;