RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where bioproject = "PRJNA611476", tax_clade = "FCB group" and tax_phylum = "Candidatus Zixiibacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Zixiibacteriota · 4 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 4 ✖

bioproject 1

  • PRJNA611476 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28880147 28880147 PRJNA611476_P_NODE_50728_length_306_cov_1.145923_g49937_i0 PRJNA611476 50728 306 1.145923 3.50652438 Candidatus Zixiibacteriota bacterium 2053527 Bacteria Bacteria 160 4.48e-44   NR HXG52627.1 2053527 g49937 i0 79.8 0.970588235294118 99 20 97.1 0 306 10 315 413 HXG52627.1 FAD-binding protein [Candidatus Zixiibacteriota bacterium] diamond 297 160 1 Bacteria FCB group Pseudomonadati Candidatus Zixiibacteriota         Candidatus Zixiibacteriota bacterium
29859039 29859039 PRJNA611476_P_NODE_94071_length_247_cov_0.885057_g93280_i0 PRJNA611476 94071 247 0.885057 2.18609079 Candidatus Zixiibacteriota bacterium 2053527 Bacteria Bacteria 56.2 7.03e-7   NR RJP78234.1 2053527 g93280 i0 41.1 1.77327935222672 73 37 81.4 2 38 238 66 138 RJP78234.1 MAG: M28 family peptidase [Candidatus Zixiibacteriota bacterium] diamond 438 56.2 1 Bacteria FCB group Pseudomonadati Candidatus Zixiibacteriota         Candidatus Zixiibacteriota bacterium
30048433 30048433 PRJNA611476_P_NODE_51971_length_303_cov_1.004348_g51180_i0 PRJNA611476 51971 303 1.004348 3.04317444 Candidatus Zixiibacteriota bacterium 2053527 Bacteria Bacteria 54.7 4.92e-6   NR MCP4704016.1 2053527 g51180 i0 48.5 0.673267326732673 68 21 67.3 4 9 212 308 361 MCP4704016.1 HYR domain-containing protein [Candidatus Zixiibacteriota bacterium] diamond 204 54.7 1 Bacteria FCB group Pseudomonadati Candidatus Zixiibacteriota         Candidatus Zixiibacteriota bacterium
30459790 30459790 PRJNA611476_P_NODE_57433_length_289_cov_1.782407_g56642_i0 PRJNA611476 57433 289 1.782407 5.15115623 Candidatus Zixiibacteriota bacterium 2053527 Bacteria Bacteria 54.3 3.39e-6   NR HEX2897853.1 2053527 g56642 i0 34.8 0.923875432525952 89 57 92.4 1 19 285 122 209 HEX2897853.1 CHRD domain-containing protein [Candidatus Zixiibacteriota bacterium] diamond 267 54.3 1 Bacteria FCB group Pseudomonadati Candidatus Zixiibacteriota         Candidatus Zixiibacteriota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;