RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA611476", tax_clade = "FCB group" and tax_phylum = "Balneolota"

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tax_superkingdom 1

tax_phylum 1

  • Balneolota · 7 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 7 ✖

bioproject 1

  • PRJNA611476 · 7 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26808575 26808575 PRJNA611476_P_NODE_98501_length_246_cov_0.890173_g97710_i0 PRJNA611476 98501 246 0.890173 2.18982558 Rhodohalobacter 1974209 Bacteria Bacteria 46.2 0.00111   NR MEX0905382.1 2053516 g97710 i0 62.5 1.17073170731707 32 12 39 0 245 150 116 147 MEX0905382.1 hypothetical protein [Balneolaceae bacterium] diamond 288 46.6 0.991416309012876 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae   Balneolaceae bacterium
26985205 26985205 PRJNA611476_P_NODE_39162_length_340_cov_0.835206_g38371_i0 PRJNA611476 39162 340 0.835206 2.8397004 Halalkalibaculum sp. DA384 3373606 Bacteria Bacteria 54.3 9.46e-6   NR WP_395275440.1 3373606 g38371 i0 42.3 2.13529411764706 71 37 59.1 2 221 21 439 509 WP_395275440.1 glycoside hydrolase family 32 protein [Halalkalibaculum sp. DA384] diamond 726 54.3 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Halalkalibaculum Halalkalibaculum sp. DA384
27048600 27048600 PRJNA611476_P_NODE_111682_length_242_cov_0.911243_g110891_i0 PRJNA611476 111682 242 0.911243 2.20520806 Balneolaceae bacterium 2053516 Bacteria Bacteria 134 2.06e-36   NR MEX0638839.1 2053516 g110891 i0 76.3 2.97520661157025 80 19 99.2 0 3 242 88 167 MEX0638839.1 DNA-directed RNA polymerase subunit alpha [Balneolaceae bacterium] diamond 720 134 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae   Balneolaceae bacterium
28122514 28122514 PRJNA611476_P_NODE_97445_length_246_cov_0.890173_g96654_i0 PRJNA611476 97445 246 0.890173 2.18982558 Balneola sp. 2024824 Bacteria Bacteria 142 4.3499999999999997e-38   NR MEP1307427.1 2024824 g96654 i0 81.5 3.96341463414634 81 15 98.8 0 243 1 92 172 MEP1307427.1 rhodanese-like domain-containing protein [Balneola sp.] diamond 975 142 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Balneola Balneola sp.
29859040 29859040 PRJNA611476_P_NODE_94431_length_247_cov_0.885057_g93640_i0 PRJNA611476 94431 247 0.885057 2.18609079 Balneolales bacterium 2497613 Bacteria Bacteria 119 4.57e-29   NR MEX0779214.1 2497613 g93640 i0 84 1.96761133603239 81 13 98.4 0 244 2 324 404 MEX0779214.1 efflux RND transporter permease subunit [Balneolales bacterium] diamond 486 119 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales     Balneolales bacterium
29890863 29890863 PRJNA611476_P_NODE_91631_length_248_cov_0.880000_g90840_i0 PRJNA611476 91631 248 0.88 2.1824 Balneolaceae bacterium 2053516 Bacteria Bacteria 140 7.949999999999999e-37   NR MEX1212227.1 2053516 g90840 i0 81.5 0.979838709677419 81 15 98 0 4 246 397 477 MEX1212227.1 CocE/NonD family hydrolase [Balneolaceae bacterium] diamond 243 140 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae   Balneolaceae bacterium
31628860 31628860 PRJNA611476_P_NODE_88896_length_249_cov_0.875000_g88105_i0 PRJNA611476 88896 249 0.875 2.17875 Balneolaceae bacterium 2053516 Bacteria Bacteria 87 9.61e-19   NR MBO6536447.1 2053516 g88105 i0 74 3.55421686746988 50 13 60.2 0 151 2 2 51 MBO6536447.1 WbqC family protein [Balneolaceae bacterium] diamond 885 87 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae   Balneolaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;