RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA611476", tax_clade = "Candidatus Thermofonsia Clade 3" and tax_phylum = "Chloroflexota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 2 ✖

tax_kingdom 1

tax_clade 1

  • Candidatus Thermofonsia Clade 3 · 2 ✖

bioproject 1

  • PRJNA611476 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7525478 7525478 PRJNA611476_P_NODE_17586_length_472_cov_0.994987_g16796_i0 PRJNA611476 17586 472 0.994987 4.69633864 Bacillati 1783272 Bacteria Bacteria 52.8 0.046   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g16796 i0 100 0.13135593220339 28 0 6 0 430 457 2146251 2146224 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 62 52.8 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.
28722491 28722491 PRJNA611476_P_NODE_52567_length_301_cov_1.350877_g51776_i0 PRJNA611476 52567 301 1.350877 4.06613977 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 66.2 4.12e-10   NR GIV84776.1 2838777 g51776 i0 42.2 2.3820598006644502 83 38 72.8 1 64 282 604 686 GIV84776.1 MAG: hypothetical protein KatS3mg052_1783 [Candidatus Roseilinea sp.] diamond 717 66.2 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;