RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA611476", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Poribacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Poribacteria · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA611476 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12068954 12068954 PRJNA611476_P_NODE_48850_length_311_cov_1.029412_g48059_i0 PRJNA611476 48850 311 1.029412 3.20147132 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 129 2.08e-32   NR MAT75681.1 2026781 g48059 i0 77.6 3.22186495176849 85 17 82 1 309 55 224 306 MAT75681.1 NAD(+) synthase [Candidatus Poribacteria bacterium] diamond 1002 129 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
30870097 30870097 PRJNA611476_P_NODE_98674_length_246_cov_0.890173_g97883_i0 PRJNA611476 98674 246 0.890173 2.18982558 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 108 8.280000000000001e-26   NR GIX05774.1 2026781 g97883 i0 83.3 1.31707317073171 54 9 65.9 0 1 162 329 382 GIX05774.1 MAG: galactonate dehydratase [Candidatus Poribacteria bacterium] diamond 324 108 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
31628856 31628856 PRJNA611476_P_NODE_85196_length_250_cov_0.870056_g84405_i0 PRJNA611476 85196 250 0.870056 2.17514 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 47.8 7.22e-4   NR HDO76145.1 2026781 g84405 i0 42.6 1.464 61 34 72 1 14 193 1106 1166 HDO76145.1 response regulator [Candidatus Poribacteria bacterium] diamond 366 47.8 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
31660303 31660303 PRJNA611476_P_NODE_67277_length_272_cov_1.115578_g66486_i0 PRJNA611476 67277 272 1.115578 3.03437216 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 139 4.8e-36   NR MCE2402501.1 2026781 g66486 i0 76.4 13.6323529411765 89 21 98.2 0 6 272 75 163 MCE2402501.1 GHMP kinase [Candidatus Poribacteria bacterium] diamond 3708 139 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;