RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA611476", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Methylomirabilota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Methylomirabilota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA611476 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29290690 29290690 PRJNA611476_P_NODE_84909_length_250_cov_0.870056_g84118_i0 PRJNA611476 84909 250 0.870056 2.17514 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 80.9 2.45e-16   NR HKZ06465.1 2072417 g84118 i0 59.5 0.948 79 31 94.8 1 239 3 84 161 HKZ06465.1 DUF4197 domain-containing protein [Candidatus Methylomirabilota bacterium] diamond 237 80.9 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
29429854 29429854 PRJNA611476_P_NODE_100549_length_245_cov_0.901163_g99758_i0 PRJNA611476 100549 245 0.901163 2.20784935 Bacillati 1783272 Bacteria Bacteria 124 2.49e-31   NR HTO82859.1 2072417 g99758 i0 74.1 1.98367346938776 81 21 99.2 0 3 245 258 338 HTO82859.1 IS1182 family transposase [Candidatus Methylomirabilota bacterium] diamond 486 124 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;