RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA610520" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA610520 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23540978 23540978 PRJNA610520_S_NODE_65619_length_245_cov_1.767442_g65529_i0 PRJNA610520 65619 245 1.767442 4.3302329 Perkinsus chesapeaki 330153 SAR_Eukaryotes SAR_Eukaryotes 75.5 3.86e-15   NR KAF4659003.1 330153 g65529 i0 71.7 1.29795918367347 53 15 64.9 0 3 161 89 141 KAF4659003.1 hypothetical protein FOL47_007759 [Perkinsus chesapeaki] diamond 318 75.5 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus chesapeaki
29258827 29258827 PRJNA610520_S_NODE_48949_length_274_cov_2.945274_g48859_i0 PRJNA610520 48949 274 2.945274 8.07005076 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 67.8 8.23e-11   NR KAF4664441.1 32597 g48859 i0 43.4 3.05474452554745 76 42 83.2 1 16 243 419 493 KAF4664441.1 hypothetical protein FOL46_004243 [Perkinsus olseni] diamond 837 67.8 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;