RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA610520" and tax_phylum = "Cnidaria"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA610520 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9516724 9516724 PRJNA610520_S_NODE_23848_length_344_cov_1.498155_g23758_i0 PRJNA610520 23848 344 1.498155 5.1536532 Anemonia sulcata 6108 Cnidaria other_Eukaryota 52.8 0.033   NTclustered gi|2917940744|emb|OZ237568.1| 6108 g23758 i0 96.875 0.0930232558139535 32 0 9 1 21 52 10153897 10153927 Anemonia sulcata genome assembly, chromosome: 14 blastn 32 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
32369768 32369768 PRJNA610520_S_NODE_11059_length_410_cov_8.427300_g10969_i0 PRJNA610520 11059 410 8.4273 34.55193 Acropora 6127 Cnidaria other_Eukaryota 53.1 5.09e-5   NR XP_015752491.1 70779 g10969 i0 30.6 1.62439024390244 111 74 79 2 13 336 465 575 XP_015752491.1 PREDICTED: uncharacterized protein LOC107332276 [Acropora digitifera] diamond 666 53.1 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Acropora Acropora digitifera
32798025 32798025 PRJNA610520_S_NODE_10500_length_415_cov_2.616959_g10410_i0 PRJNA610520 10500 415 2.616959 10.86037985 Desmophyllum pertusum 174260 Cnidaria other_Eukaryota 51.6 1.8e-4   NR KAJ7387501.1 174260 g10410 i0 31.7 1.00481927710843 139 57 94 7 24 413 484 593 KAJ7387501.1 hypothetical protein OS493_000831 [Desmophyllum pertusum] diamond 417 51.6 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Caryophylliidae Desmophyllum Desmophyllum pertusum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;